Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm24037-201ENSMUST00000082871 180 ntBASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim54Q9ERP3 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Mir669l-201ENSMUST00000103771 98 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm13343-201ENSMUST00000116474 105 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm13510-201ENSMUST00000118659 429 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm15106-201ENSMUST00000119691 821 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm15223-201ENSMUST00000120989 826 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm25107-201ENSMUST00000122472 129 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm13901-201ENSMUST00000137252 468 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm25970-201ENSMUST00000157165 86 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm22080-201ENSMUST00000157591 106 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm21737-201ENSMUST00000178112 664 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm21815-201ENSMUST00000178213 664 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm20874-201ENSMUST00000178356 663 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm21744-201ENSMUST00000178403 662 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm20901-201ENSMUST00000180177 664 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm28755-201ENSMUST00000185773 199 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm21647-201ENSMUST00000189755 664 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm9696-202ENSMUST00000191541 830 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm37029-201ENSMUST00000195773 239 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm44030-201ENSMUST00000204865 432 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm19140-201ENSMUST00000209790 421 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm45814-201ENSMUST00000212646 775 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm7692-201ENSMUST00000213534 409 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.43□□□□□ -1.86
Trim54Q9ERP3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm13331-201ENSMUST00000117500 448 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm13475-201ENSMUST00000119290 234 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm11456-201ENSMUST00000121070 256 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm3104-201ENSMUST00000171004 473 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm27520-201ENSMUST00000184872 81 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm28843-201ENSMUST00000189198 678 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm29546-201ENSMUST00000191171 678 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm43115-201ENSMUST00000196244 160 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm43578-201ENSMUST00000201250 459 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm44266-201ENSMUST00000205235 500 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm45252-201ENSMUST00000211579 397 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Olfr895-201ENSMUST00000093864 951 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trim54Q9ERP3 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm23422-201ENSMUST00000102000 107 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm22936-201ENSMUST00000103955 126 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm25848-201ENSMUST00000116790 144 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm5287-201ENSMUST00000120666 598 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm14736-201ENSMUST00000121470 336 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm15466-201ENSMUST00000122299 333 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm22322-201ENSMUST00000157151 111 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm22098-201ENSMUST00000157930 85 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm23016-201ENSMUST00000158431 62 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm23862-201ENSMUST00000180342 94 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Mir7081-201ENSMUST00000184490 75 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Mir7062-201ENSMUST00000185038 66 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms