Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm26195-201ENSMUST00000175035 101 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm27544-201ENSMUST00000185069 155 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm3724-201ENSMUST00000197957 349 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm17890-201ENSMUST00000221419 757 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.96□□□□□ -2.1
Lima1Q9ERG0 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm22978-201ENSMUST00000082607 160 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm26206-201ENSMUST00000082908 110 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Lima1Q9ERG0 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm24984-201ENSMUST00000104454 133 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm11935-201ENSMUST00000118608 399 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm14748-201ENSMUST00000119819 411 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm16355-201ENSMUST00000128606 231 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm25368-201ENSMUST00000158847 131 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Mir8106-201ENSMUST00000184520 139 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm27979-201ENSMUST00000185126 56 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm28755-201ENSMUST00000185773 199 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm8041-201ENSMUST00000199755 616 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm44472-201ENSMUST00000204922 943 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm18729-201ENSMUST00000217230 621 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm26437-201ENSMUST00000082595 105 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm25130-201ENSMUST00000082650 156 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Snord14d-201ENSMUST00000083424 86 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.95□□□□□ -2.1
Lima1Q9ERG0 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm15497-201ENSMUST00000119137 551 ntBASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm24840-201ENSMUST00000122603 147 ntBASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm25637-201ENSMUST00000157529 107 ntBASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm20415-201ENSMUST00000172877 423 ntBASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm27861-201ENSMUST00000183920 214 ntBASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Mir6950-201ENSMUST00000184438 73 ntBASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm38149-201ENSMUST00000191943 339 ntBASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm37692-201ENSMUST00000192633 232 ntBASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm25008-201ENSMUST00000083809 81 ntBASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.94□□□□□ -2.1
Lima1Q9ERG0 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm14670-201ENSMUST00000117327 337 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm8217-201ENSMUST00000119136 465 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm13603-201ENSMUST00000119404 83 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm14867-201ENSMUST00000120156 866 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm16218-201ENSMUST00000155424 388 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm25961-201ENSMUST00000157174 135 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm25283-201ENSMUST00000157272 77 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm25488-201ENSMUST00000158728 118 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm17162-201ENSMUST00000168538 473 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm24754-201ENSMUST00000177997 107 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm28627-201ENSMUST00000186141 453 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm24622-201ENSMUST00000082619 162 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Snord7-201ENSMUST00000083781 97 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm24698-201ENSMUST00000083883 130 ntBASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Lima1Q9ERG0 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm24098-201ENSMUST00000102075 109 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm25381-201ENSMUST00000102078 109 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Mir344e-201ENSMUST00000104677 66 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.92□□□□□ -2.1
Lima1Q9ERG0 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 115.8 ms