Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm23538-201ENSMUST00000157535 101 ntBASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Gm23032-201ENSMUST00000157995 107 ntBASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Gm22521-201ENSMUST00000158272 134 ntBASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Gm22858-201ENSMUST00000174972 76 ntBASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Gm28688-201ENSMUST00000187301 268 ntBASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Gm24044-201ENSMUST00000083107 156 ntBASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Scn4aQ9ER60 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm22143-201ENSMUST00000157401 203 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm22554-201ENSMUST00000157798 147 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm25334-201ENSMUST00000158036 110 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Mir8118-201ENSMUST00000183962 129 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm37054-201ENSMUST00000193481 543 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm45438-201ENSMUST00000210242 564 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Rny1-201ENSMUST00000083767 112 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm23516-201ENSMUST00000093728 107 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm14882-201ENSMUST00000117216 218 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm16431-201ENSMUST00000117454 431 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm15177-201ENSMUST00000120491 577 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm25102-201ENSMUST00000122479 112 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm22228-201ENSMUST00000157364 101 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm24811-201ENSMUST00000175313 100 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Mir6405-201ENSMUST00000184584 124 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Gm43582-201ENSMUST00000196149 343 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.77□□□□□ -1.97
Scn4aQ9ER60 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Gm12876-201ENSMUST00000120975 408 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Gm13424-201ENSMUST00000122301 354 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Gm24836-201ENSMUST00000122609 108 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Gm23111-201ENSMUST00000122652 105 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Gm23342-201ENSMUST00000158958 115 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Mir6353-201ENSMUST00000183596 113 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Gm37979-201ENSMUST00000193065 712 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Scn4aQ9ER60 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.76□□□□□ -1.97
Scn4aQ9ER60 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Gm28802-201ENSMUST00000188624 944 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Gm6651-201ENSMUST00000189471 271 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Gm38238-201ENSMUST00000194334 346 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Gm44266-201ENSMUST00000205235 500 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.75□□□□□ -1.97
Scn4aQ9ER60 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Gm15452-201ENSMUST00000119877 240 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Gm8676-201ENSMUST00000184206 637 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Gm16261-201ENSMUST00000096813 205 ntBASIC2.75□□□□□ -1.97
Scn4aQ9ER60 Gm22469-201ENSMUST00000104118 133 ntBASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Spanxn4-201ENSMUST00000172433 424 ntBASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Gm21894-201ENSMUST00000179631 546 ntBASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Mir7052-201ENSMUST00000184821 65 ntBASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Gm27608-201ENSMUST00000184822 162 ntBASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Gm28917-201ENSMUST00000187294 237 ntBASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Gm28766-201ENSMUST00000191086 234 ntBASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.74□□□□□ -1.97
Scn4aQ9ER60 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Scn4aQ9ER60 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Scn4aQ9ER60 Gm23886-201ENSMUST00000122684 313 ntBASIC2.73□□□□□ -1.97
Scn4aQ9ER60 Gm24900-201ENSMUST00000158128 134 ntBASIC2.73□□□□□ -1.97
Scn4aQ9ER60 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC2.73□□□□□ -1.97
Scn4aQ9ER60 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.73□□□□□ -1.97
Scn4aQ9ER60 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.73□□□□□ -1.97
Scn4aQ9ER60 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.73□□□□□ -1.97
Scn4aQ9ER60 Gm44125-201ENSMUST00000203068 448 ntBASIC2.73□□□□□ -1.97
Scn4aQ9ER60 Gm18691-201ENSMUST00000203593 872 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 114.3 ms