Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm23078-201ENSMUST00000157848 148 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm24436-201ENSMUST00000157889 302 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm23269-201ENSMUST00000178701 107 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.54□□□□□ -2
Vps35Q9EQH3 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm31230-201ENSMUST00000199725 785 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm45232-201ENSMUST00000207811 162 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm45288-201ENSMUST00000210236 151 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm45879-201ENSMUST00000212521 392 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm18160-201ENSMUST00000214279 827 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm18703-201ENSMUST00000215318 333 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.54□□□□□ -2
Vps35Q9EQH3 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.54□□□□□ -2
Vps35Q9EQH3 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm23741-201ENSMUST00000097237 171 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Vps35Q9EQH3 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.53□□□□□ -2
Vps35Q9EQH3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.53□□□□□ -2
Vps35Q9EQH3 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 Gm28744-201ENSMUST00000189939 340 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.53□□□□□ -2
Vps35Q9EQH3 Gm43355-201ENSMUST00000196541 346 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 Gm43955-201ENSMUST00000204332 142 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 Gm45101-201ENSMUST00000208327 232 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 Gm45678-201ENSMUST00000210509 295 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.53□□□□□ -2
Vps35Q9EQH3 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.53□□□□□ -2
Vps35Q9EQH3 Gm24490-201ENSMUST00000083803 98 ntBASIC2.53□□□□□ -2
Vps35Q9EQH3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.53□□□□□ -2
Vps35Q9EQH3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.53□□□□□ -2.01
Vps35Q9EQH3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm25526-201ENSMUST00000104332 132 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm26247-201ENSMUST00000116702 91 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm11352-201ENSMUST00000119264 517 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm14821-201ENSMUST00000121975 435 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm22563-201ENSMUST00000157333 269 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm23033-201ENSMUST00000157996 134 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm24922-201ENSMUST00000158511 102 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm26214-201ENSMUST00000158581 107 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm22131-201ENSMUST00000178415 94 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm24713-201ENSMUST00000178850 107 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm25448-201ENSMUST00000180065 107 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Mir6363-201ENSMUST00000184880 114 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm5116-201ENSMUST00000187732 463 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm29640-201ENSMUST00000187972 278 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm29627-201ENSMUST00000187984 463 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm45445-201ENSMUST00000209586 232 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.52□□□□□ -2.01
Vps35Q9EQH3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Vps35Q9EQH3 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Snord104-201ENSMUST00000083192 70 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm23096-201ENSMUST00000083447 107 ntBASIC2.52□□□□□ -2.01
Vps35Q9EQH3 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Mir344c-201ENSMUST00000103919 92 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm14579-201ENSMUST00000117068 283 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm12598-201ENSMUST00000117333 830 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm6574-201ENSMUST00000120037 362 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm25808-201ENSMUST00000122784 284 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm14333-201ENSMUST00000130484 264 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm25220-201ENSMUST00000157546 95 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm25706-201ENSMUST00000157828 247 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm22611-201ENSMUST00000158288 150 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm20660-201ENSMUST00000177515 289 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm6801-201ENSMUST00000190697 339 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm38311-201ENSMUST00000192945 165 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Gm45658-201ENSMUST00000209197 580 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Vps35Q9EQH3 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms