Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Snord13-201ENSMUST00000157627 104 ntBASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Gm26089-201ENSMUST00000157898 107 ntBASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Gm29550-201ENSMUST00000185543 285 ntBASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Gm43652-201ENSMUST00000196219 675 ntBASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Gm42824-201ENSMUST00000199361 247 ntBASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 AC165437.1-201ENSMUST00000228640 536 ntBASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Gm14940-201ENSMUST00000119309 495 ntBASIC1.5□□□□□ -2.17
Cpsf1Q9EPU4 Gm5958-201ENSMUST00000147698 297 ntBASIC1.5□□□□□ -2.17
Cpsf1Q9EPU4 Gm23053-201ENSMUST00000175136 96 ntBASIC1.5□□□□□ -2.17
Cpsf1Q9EPU4 Gm22929-201ENSMUST00000175517 107 ntBASIC1.5□□□□□ -2.17
Cpsf1Q9EPU4 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.5□□□□□ -2.17
Cpsf1Q9EPU4 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
Cpsf1Q9EPU4 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Cpsf1Q9EPU4 Gm14428-201ENSMUST00000120408 822 ntBASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Gm25025-201ENSMUST00000175018 111 ntBASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Gm19932-201ENSMUST00000177033 313 ntBASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Gm25416-201ENSMUST00000104221 107 ntBASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Gm44720-201ENSMUST00000206076 260 ntBASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 AC124356.2-201ENSMUST00000221874 336 ntBASIC1.49□□□□□ -2.17
Cpsf1Q9EPU4 AC164164.1-201ENSMUST00000223245 2340 ntBASIC1.48□□□□□ -2.17
Cpsf1Q9EPU4 Gm14786-201ENSMUST00000117127 944 ntBASIC1.48□□□□□ -2.17
Cpsf1Q9EPU4 Gm7164-201ENSMUST00000117503 450 ntBASIC1.48□□□□□ -2.17
Cpsf1Q9EPU4 Gm27477-201ENSMUST00000184649 143 ntBASIC1.48□□□□□ -2.17
Cpsf1Q9EPU4 Gm43316-201ENSMUST00000197252 1295 ntBASIC1.48□□□□□ -2.17
Cpsf1Q9EPU4 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC1.48□□□□□ -2.17
Cpsf1Q9EPU4 Gm44548-201ENSMUST00000208929 192 ntBASIC1.48□□□□□ -2.17
Cpsf1Q9EPU4 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
Cpsf1Q9EPU4 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cpsf1Q9EPU4 Gm11359-201ENSMUST00000120039 567 ntBASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Gm12587-201ENSMUST00000120180 427 ntBASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Gm12155-201ENSMUST00000121267 160 ntBASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Gm24965-201ENSMUST00000157922 106 ntBASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Gm27582-201ENSMUST00000184084 126 ntBASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Gm9373-201ENSMUST00000208724 599 ntBASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Cpsf1Q9EPU4 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 Gm23705-201ENSMUST00000104370 130 ntBASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 Gm25669-201ENSMUST00000157699 112 ntBASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 Gm2930-201ENSMUST00000170403 474 ntBASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 Mir6380-201ENSMUST00000184334 81 ntBASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 Gm18982-201ENSMUST00000198118 529 ntBASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 Gm24611-201ENSMUST00000083272 107 ntBASIC1.46□□□□□ -2.18
Cpsf1Q9EPU4 Gm14835-201ENSMUST00000119039 315 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm21737-201ENSMUST00000178112 664 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm21729-201ENSMUST00000180058 664 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm21853-201ENSMUST00000180071 664 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm20901-201ENSMUST00000180177 664 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm29073-201ENSMUST00000185563 664 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm29495-201ENSMUST00000189319 664 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm28090-201ENSMUST00000189458 664 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm21647-201ENSMUST00000189755 664 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm29165-201ENSMUST00000190655 664 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm29211-201ENSMUST00000191470 664 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm36891-201ENSMUST00000191995 655 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Gm43541-201ENSMUST00000197208 581 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.45□□□□□ -2.18
Cpsf1Q9EPU4 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Cpsf1Q9EPU4 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.44□□□□□ -2.18
Cpsf1Q9EPU4 Gm11786-201ENSMUST00000120799 155 ntBASIC1.44□□□□□ -2.18
Cpsf1Q9EPU4 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC1.44□□□□□ -2.18
Cpsf1Q9EPU4 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.44□□□□□ -2.18
Cpsf1Q9EPU4 Gm42796-201ENSMUST00000199913 1087 ntBASIC1.44□□□□□ -2.18
Cpsf1Q9EPU4 Gm44520-201ENSMUST00000205447 802 ntBASIC1.44□□□□□ -2.18
Cpsf1Q9EPU4 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.44□□□□□ -2.18
Cpsf1Q9EPU4 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Cpsf1Q9EPU4 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Cpsf1Q9EPU4 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 Gm22151-201ENSMUST00000116963 58 ntBASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 Gm13903-201ENSMUST00000120945 193 ntBASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 Gm22478-201ENSMUST00000122570 154 ntBASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 Gm26186-201ENSMUST00000157689 125 ntBASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 Gm25454-201ENSMUST00000157947 315 ntBASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 Gm23893-201ENSMUST00000158106 134 ntBASIC1.43□□□□□ -2.18
Cpsf1Q9EPU4 Mir6393-201ENSMUST00000183709 94 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms