Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm29647-201ENSMUST00000188795 666 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm20832-201ENSMUST00000189076 665 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm28241-201ENSMUST00000190916 235 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm28504-201ENSMUST00000190977 666 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm31511-201ENSMUST00000193134 657 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm35843-201ENSMUST00000193716 666 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm30638-201ENSMUST00000195570 656 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm36728-201ENSMUST00000195782 665 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm3442-201ENSMUST00000216808 710 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm19118-201ENSMUST00000222554 98 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Olfr815-201ENSMUST00000071557 951 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Gm26055-201ENSMUST00000083038 107 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Cdc40Q9DC48 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.2□□□□□ -2.06
Cdc40Q9DC48 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm22270-201ENSMUST00000104034 132 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm12878-201ENSMUST00000118744 332 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm15112-201ENSMUST00000120152 860 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm25321-201ENSMUST00000122558 102 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm16129-201ENSMUST00000152628 486 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm22227-201ENSMUST00000157356 259 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm25863-201ENSMUST00000158249 329 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm22257-201ENSMUST00000158687 301 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm44554-201ENSMUST00000208738 147 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm25755-201ENSMUST00000083396 107 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm25628-201ENSMUST00000084002 105 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Gm23516-201ENSMUST00000093728 107 ntBASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Cdc40Q9DC48 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm26154-201ENSMUST00000102339 96 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm15846-201ENSMUST00000116022 320 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Mir467h-201ENSMUST00000116759 121 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm13862-201ENSMUST00000121220 197 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm12443-201ENSMUST00000122308 323 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm22483-201ENSMUST00000157986 274 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm3102-201ENSMUST00000164236 489 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Spanxn4-201ENSMUST00000172433 424 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm28917-201ENSMUST00000187294 237 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm29600-201ENSMUST00000188687 377 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm28766-201ENSMUST00000191086 234 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm8747-201ENSMUST00000195392 751 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm45445-201ENSMUST00000209586 232 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm45791-201ENSMUST00000212908 352 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 AC159476.2-201ENSMUST00000216221 418 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Cdc40Q9DC48 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Mir423-201ENSMUST00000083584 109 ntBASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Cdc40Q9DC48 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm15110-201ENSMUST00000117545 881 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm11785-201ENSMUST00000120165 601 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm12825-201ENSMUST00000120249 563 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm12045-201ENSMUST00000122122 573 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm14713-201ENSMUST00000122362 686 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm26105-201ENSMUST00000157253 190 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm22947-201ENSMUST00000158559 91 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm24137-201ENSMUST00000180055 79 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm22391-201ENSMUST00000180356 79 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm37568-201ENSMUST00000191755 364 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Trbv6-201ENSMUST00000193743 276 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm43722-201ENSMUST00000196054 124 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.17□□□□□ -2.06
Cdc40Q9DC48 AC091260.1-201ENSMUST00000216112 229 ntBASIC2.17□□□□□ -2.06
Cdc40Q9DC48 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms