Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.99□□□□□ -2.09
Ccdc3Q9D6Y1 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.99□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Ccdc3Q9D6Y1 Snora69-201ENSMUST00000083708 131 ntBASIC1.99□□□□□ -2.09
Ccdc3Q9D6Y1 Gm22866-201ENSMUST00000083947 177 ntBASIC1.99□□□□□ -2.09
Ccdc3Q9D6Y1 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Ccdc3Q9D6Y1 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm14894-201ENSMUST00000117170 270 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm14073-201ENSMUST00000117344 381 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm12513-201ENSMUST00000118617 352 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm26275-201ENSMUST00000157101 268 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm23324-201ENSMUST00000157421 131 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm22339-201ENSMUST00000157718 62 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm23043-201ENSMUST00000157890 109 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm18397-201ENSMUST00000176704 587 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm22131-201ENSMUST00000178415 94 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm29604-201ENSMUST00000187176 163 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm29460-201ENSMUST00000188607 714 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm29288-201ENSMUST00000191582 901 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm37449-201ENSMUST00000193016 270 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm37550-201ENSMUST00000193230 463 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm18658-201ENSMUST00000195558 270 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm43979-201ENSMUST00000203179 475 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm3442-201ENSMUST00000216808 710 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 AC154552.5-201ENSMUST00000222352 207 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm22978-201ENSMUST00000082607 160 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm25636-201ENSMUST00000082666 133 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm22723-201ENSMUST00000083820 129 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.98□□□□□ -2.09
Ccdc3Q9D6Y1 Gm25938-201ENSMUST00000104139 166 ntBASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Gm5287-201ENSMUST00000120666 598 ntBASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Gm11384-201ENSMUST00000121376 303 ntBASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Gm9225-201ENSMUST00000121921 836 ntBASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Gm24044-201ENSMUST00000083107 156 ntBASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc3Q9D6Y1 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm23691-201ENSMUST00000101878 107 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm14358-201ENSMUST00000118458 403 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm16053-201ENSMUST00000120511 188 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm22793-201ENSMUST00000157227 330 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm26348-201ENSMUST00000157528 240 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm25637-201ENSMUST00000157529 107 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm23754-201ENSMUST00000157576 63 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm24960-201ENSMUST00000157923 90 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm25460-201ENSMUST00000157954 127 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm24857-201ENSMUST00000158061 310 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm17162-201ENSMUST00000168538 473 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm26195-201ENSMUST00000175035 101 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm27861-201ENSMUST00000183920 214 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Mir7016-201ENSMUST00000184308 72 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm27443-201ENSMUST00000184660 98 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm28627-201ENSMUST00000186141 453 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm18341-201ENSMUST00000197538 622 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm43193-201ENSMUST00000197732 441 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm43427-201ENSMUST00000198188 331 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm43284-201ENSMUST00000200103 253 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 AC134335.1-201ENSMUST00000227626 329 ntBASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Ccdc3Q9D6Y1 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms