Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm15065-201ENSMUST00000121699 273 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm26414-201ENSMUST00000157674 269 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm22555-201ENSMUST00000157801 62 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm25490-201ENSMUST00000158734 130 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm23022-201ENSMUST00000158768 180 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm20794-201ENSMUST00000177626 628 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm21744-201ENSMUST00000178403 662 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm21171-201ENSMUST00000180048 673 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm29413-201ENSMUST00000186019 880 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm28700-201ENSMUST00000187614 579 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm29639-201ENSMUST00000188375 580 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm28843-201ENSMUST00000189198 678 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm29546-201ENSMUST00000191171 678 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.12□□□□□ -1.91
Vps28Q9D1C8 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.12□□□□□ -1.91
Vps28Q9D1C8 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.12□□□□□ -1.91
Vps28Q9D1C8 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm22939-201ENSMUST00000103958 131 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm23175-201ENSMUST00000104371 132 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm14971-201ENSMUST00000117980 663 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm11253-201ENSMUST00000118486 201 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm14593-201ENSMUST00000119948 294 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm16411-201ENSMUST00000122164 1100 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm23559-201ENSMUST00000157824 103 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm18520-201ENSMUST00000174783 658 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm27249-201ENSMUST00000185049 328 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm28534-201ENSMUST00000187744 676 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Vps28Q9D1C8 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm14877-201ENSMUST00000119803 478 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm12723-201ENSMUST00000120700 451 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm12876-201ENSMUST00000120975 408 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm11414-201ENSMUST00000121795 263 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm24787-201ENSMUST00000157380 123 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm24213-201ENSMUST00000158255 258 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm24551-201ENSMUST00000158645 92 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm8151-201ENSMUST00000184817 871 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm18341-201ENSMUST00000197538 622 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm18113-201ENSMUST00000220630 303 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm23097-201ENSMUST00000083448 105 ntBASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Vps28Q9D1C8 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm22831-201ENSMUST00000102473 109 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm24889-201ENSMUST00000104388 132 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm13329-201ENSMUST00000117063 265 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm12213-201ENSMUST00000119924 353 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm7071-201ENSMUST00000120458 462 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm9225-201ENSMUST00000121921 836 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm26027-201ENSMUST00000122725 268 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm3104-201ENSMUST00000171004 473 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm26652-202ENSMUST00000181672 475 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm44600-201ENSMUST00000208540 111 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Gm24045-201ENSMUST00000083113 98 ntBASIC3.09□□□□□ -1.91
Vps28Q9D1C8 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.08□□□□□ -1.92
Vps28Q9D1C8 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Vps28Q9D1C8 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Vps28Q9D1C8 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.08□□□□□ -1.92
Vps28Q9D1C8 Gm12806-201ENSMUST00000119384 268 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms