Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm3104-201ENSMUST00000171004 473 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm29452-201ENSMUST00000187996 313 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm28860-201ENSMUST00000188103 313 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm28211-201ENSMUST00000190920 315 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm25202-201ENSMUST00000082838 191 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm26263-201ENSMUST00000083281 164 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm6274-201ENSMUST00000118173 797 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm11512-201ENSMUST00000119669 663 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm9043-201ENSMUST00000119677 314 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm12213-201ENSMUST00000119924 353 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm11229-201ENSMUST00000121993 437 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm15167-201ENSMUST00000121997 187 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm14578-201ENSMUST00000122166 391 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm23791-201ENSMUST00000122553 293 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm22611-201ENSMUST00000158288 150 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm7582-201ENSMUST00000160831 603 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm24418-201ENSMUST00000177597 79 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm24639-201ENSMUST00000178518 79 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm4479-201ENSMUST00000178807 171 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm23076-201ENSMUST00000179082 79 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm25077-201ENSMUST00000179157 79 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm8532-201ENSMUST00000179174 461 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm35931-201ENSMUST00000203931 448 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm19177-201ENSMUST00000204520 613 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm19140-201ENSMUST00000209790 421 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Ear14-201ENSMUST00000049559 468 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm25856-201ENSMUST00000082786 75 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Mir452-201ENSMUST00000093629 85 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ddx28Q9CWT6 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Mir673-201ENSMUST00000102361 91 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm22831-201ENSMUST00000102473 109 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm25728-201ENSMUST00000104525 159 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm14638-201ENSMUST00000121338 216 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm23886-201ENSMUST00000122684 313 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm22038-201ENSMUST00000157277 242 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm23028-201ENSMUST00000158773 265 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Mir8096-201ENSMUST00000184526 127 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm27385-201ENSMUST00000184747 104 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm19694-201ENSMUST00000192364 505 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm44465-201ENSMUST00000199536 114 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm43367-201ENSMUST00000199986 625 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm44754-201ENSMUST00000208155 400 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm45252-201ENSMUST00000211579 397 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm18015-201ENSMUST00000214879 316 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Ddx28Q9CWT6 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms