Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm14736-201ENSMUST00000121470 336 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm23867-201ENSMUST00000122649 274 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm22452-201ENSMUST00000122804 104 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm23137-201ENSMUST00000157559 107 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm28560-201ENSMUST00000186091 315 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm28334-201ENSMUST00000186653 315 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm28495-201ENSMUST00000188452 315 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm28232-201ENSMUST00000188683 315 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm28481-201ENSMUST00000189231 315 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm29059-201ENSMUST00000191534 315 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm37765-201ENSMUST00000192395 315 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm37237-201ENSMUST00000192893 315 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm36968-201ENSMUST00000193737 315 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm38290-201ENSMUST00000195238 315 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm8747-201ENSMUST00000195392 751 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm44135-201ENSMUST00000205221 368 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm7984-201ENSMUST00000060640 538 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Gm22622-201ENSMUST00000082870 129 ntBASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Smc1aQ9CU62 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Mir682-201ENSMUST00000102281 96 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm14073-201ENSMUST00000117344 381 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm14593-201ENSMUST00000119948 294 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Mir5118-201ENSMUST00000175551 67 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm25194-201ENSMUST00000177987 79 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm27786-201ENSMUST00000184337 70 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm28666-201ENSMUST00000186649 274 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm46994-201ENSMUST00000221523 219 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm5955-201ENSMUST00000222712 219 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm25404-201ENSMUST00000082970 107 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm26494-201ENSMUST00000083154 143 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm24493-201ENSMUST00000083805 143 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Smc1aQ9CU62 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Mir190b-201ENSMUST00000104803 80 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm6954-201ENSMUST00000117416 225 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm12639-201ENSMUST00000121400 493 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm9071-201ENSMUST00000165915 474 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm37037-201ENSMUST00000194475 424 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm37743-201ENSMUST00000194645 376 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm44555-201ENSMUST00000209008 148 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm45522-201ENSMUST00000210784 166 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Smc1aQ9CU62 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Smc1aQ9CU62 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm23249-201ENSMUST00000083369 161 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm23096-201ENSMUST00000083447 107 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm650-201ENSMUST00000144428 1551 ntBASIC2.87□□□□□ -1.95
Smc1aQ9CU62 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm12814-201ENSMUST00000117091 846 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm14359-201ENSMUST00000118883 424 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm14360-201ENSMUST00000120670 393 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm9498-201ENSMUST00000140849 291 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm26186-201ENSMUST00000157689 125 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm17065-201ENSMUST00000165245 239 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm8207-201ENSMUST00000171204 502 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm18417-201ENSMUST00000176564 648 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm28744-201ENSMUST00000189939 340 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm38044-201ENSMUST00000192964 487 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm38333-201ENSMUST00000193608 604 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm43193-201ENSMUST00000197732 441 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm43171-201ENSMUST00000199882 291 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Gm44449-201ENSMUST00000203610 153 ntBASIC2.86□□□□□ -1.95
Smc1aQ9CU62 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms