Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm20794-201ENSMUST00000177626 628 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm21744-201ENSMUST00000178403 662 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm21171-201ENSMUST00000180048 673 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm29413-201ENSMUST00000186019 880 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm28700-201ENSMUST00000187614 579 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm29639-201ENSMUST00000188375 580 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm28843-201ENSMUST00000189198 678 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm29546-201ENSMUST00000191171 678 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm42647-201ENSMUST00000195939 459 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm23128-202ENSMUST00000196578 133 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm45232-201ENSMUST00000207811 162 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm44555-201ENSMUST00000209008 148 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm18160-201ENSMUST00000214279 827 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm25404-201ENSMUST00000082970 107 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.9□□□□□ -1.95
Ccdc43Q9CR29 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm11221-201ENSMUST00000117230 597 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm24291-201ENSMUST00000157633 162 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm22290-201ENSMUST00000177655 107 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm22583-201ENSMUST00000178031 107 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm29429-201ENSMUST00000187071 121 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm6030-201ENSMUST00000078768 402 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm10025-201ENSMUST00000079568 372 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm22810-201ENSMUST00000082741 158 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Gm23096-201ENSMUST00000083447 107 ntBASIC2.89□□□□□ -1.95
Ccdc43Q9CR29 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm15497-201ENSMUST00000119137 551 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm7327-201ENSMUST00000120925 652 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm16021-201ENSMUST00000121176 219 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm25373-201ENSMUST00000158156 115 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm17538-201ENSMUST00000168236 327 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm25361-201ENSMUST00000179358 76 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm27608-201ENSMUST00000184822 162 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm27249-201ENSMUST00000185049 328 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm37807-201ENSMUST00000194310 190 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm43804-201ENSMUST00000198280 456 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm44472-201ENSMUST00000204922 943 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm22249-201ENSMUST00000082485 136 ntBASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Ccdc43Q9CR29 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm22936-201ENSMUST00000103955 126 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Mir190b-201ENSMUST00000104803 80 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm24464-201ENSMUST00000179697 107 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm29216-201ENSMUST00000187117 492 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm37757-201ENSMUST00000193072 210 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm44449-201ENSMUST00000203610 153 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm44903-201ENSMUST00000206840 130 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm3442-201ENSMUST00000216808 710 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Mir463-201ENSMUST00000093570 75 ntBASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.87□□□□□ -1.95
Ccdc43Q9CR29 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.86□□□□□ -1.95
Ccdc43Q9CR29 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ccdc43Q9CR29 Gm11352-201ENSMUST00000119264 517 ntBASIC2.86□□□□□ -1.95
Ccdc43Q9CR29 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.86□□□□□ -1.95
Ccdc43Q9CR29 Gm24908-201ENSMUST00000157294 127 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms