Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Use1Q9CQ56 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.16□□□□□ -2.06
Use1Q9CQ56 Gm25873-201ENSMUST00000180317 107 ntBASIC2.16□□□□□ -2.06
Use1Q9CQ56 Gm28412-201ENSMUST00000187243 177 ntBASIC2.16□□□□□ -2.06
Use1Q9CQ56 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.16□□□□□ -2.06
Use1Q9CQ56 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.16□□□□□ -2.06
Use1Q9CQ56 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.16□□□□□ -2.06
Use1Q9CQ56 Gm46389-201ENSMUST00000223199 392 ntBASIC2.16□□□□□ -2.06
Use1Q9CQ56 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.16□□□□□ -2.06
Use1Q9CQ56 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Use1Q9CQ56 Gm22061-201ENSMUST00000082557 107 ntBASIC2.16□□□□□ -2.06
Use1Q9CQ56 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Use1Q9CQ56 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Use1Q9CQ56 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Use1Q9CQ56 Gm14868-201ENSMUST00000117840 216 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm12507-201ENSMUST00000119155 415 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm16355-201ENSMUST00000128606 231 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Use1Q9CQ56 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm22083-201ENSMUST00000157586 102 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm25910-201ENSMUST00000157620 140 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm22538-201ENSMUST00000158169 299 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm22534-201ENSMUST00000158173 104 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm23819-201ENSMUST00000158744 109 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm28627-201ENSMUST00000186141 453 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm43007-201ENSMUST00000197618 291 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm43531-201ENSMUST00000200676 1114 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Use1Q9CQ56 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.15□□□□□ -2.07
Use1Q9CQ56 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.15□□□□□ -2.07
Use1Q9CQ56 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm22247-201ENSMUST00000082476 131 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm24661-201ENSMUST00000083205 104 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm22974-201ENSMUST00000083301 103 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.15□□□□□ -2.07
Use1Q9CQ56 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Use1Q9CQ56 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm13331-201ENSMUST00000117500 448 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm15177-201ENSMUST00000120491 577 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm23538-201ENSMUST00000157535 101 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm22611-201ENSMUST00000158288 150 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm16326-201ENSMUST00000162843 414 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm25874-201ENSMUST00000178030 79 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Mir7667-201ENSMUST00000183866 63 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm19224-201ENSMUST00000190477 793 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm37455-201ENSMUST00000191993 529 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm38231-201ENSMUST00000192030 347 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm44459-201ENSMUST00000203926 160 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm19140-201ENSMUST00000209790 421 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm8940-201ENSMUST00000212585 219 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.14□□□□□ -2.07
Use1Q9CQ56 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Use1Q9CQ56 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Use1Q9CQ56 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Use1Q9CQ56 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm22752-201ENSMUST00000102083 109 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm14748-201ENSMUST00000119819 411 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm12071-201ENSMUST00000121968 469 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm16510-201ENSMUST00000153501 249 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm22765-201ENSMUST00000158371 128 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm20660-201ENSMUST00000177515 289 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm37319-201ENSMUST00000193500 636 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm6059-201ENSMUST00000196903 340 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm44524-201ENSMUST00000203899 271 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm44961-201ENSMUST00000207450 196 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm46994-201ENSMUST00000221523 219 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm5955-201ENSMUST00000222712 219 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Use1Q9CQ56 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Olfr197-201ENSMUST00000080031 926 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm10343-201ENSMUST00000096279 348 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Use1Q9CQ56 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.13□□□□□ -2.07
Use1Q9CQ56 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Use1Q9CQ56 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Use1Q9CQ56 Gm22496-201ENSMUST00000104493 88 ntBASIC2.12□□□□□ -2.07
Use1Q9CQ56 Gm14894-201ENSMUST00000117170 270 ntBASIC2.12□□□□□ -2.07
Use1Q9CQ56 Gm14794-201ENSMUST00000118181 192 ntBASIC2.12□□□□□ -2.07
Use1Q9CQ56 Gm11357-201ENSMUST00000119758 954 ntBASIC2.12□□□□□ -2.07
Use1Q9CQ56 Gm22037-201ENSMUST00000157280 296 ntBASIC2.12□□□□□ -2.07
Use1Q9CQ56 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.12□□□□□ -2.07
Use1Q9CQ56 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.12□□□□□ -2.07
Use1Q9CQ56 Gm24111-201ENSMUST00000175491 97 ntBASIC2.12□□□□□ -2.07
Use1Q9CQ56 Gm25175-201ENSMUST00000178712 79 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms