Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm26045-201ENSMUST00000157862 97 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm23781-201ENSMUST00000157940 308 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm22769-201ENSMUST00000158367 98 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Mir3062-201ENSMUST00000174986 105 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm24520-201ENSMUST00000179510 110 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Mir6410-201ENSMUST00000184204 104 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm43649-201ENSMUST00000196596 391 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm32222-201ENSMUST00000203296 298 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm18540-201ENSMUST00000204025 526 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm4045-201ENSMUST00000204076 310 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm44032-201ENSMUST00000204841 166 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm45513-201ENSMUST00000210228 376 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm6796-201ENSMUST00000211919 243 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Mir28a-201ENSMUST00000083560 86 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm22350-201ENSMUST00000083924 156 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim11Q99PQ2 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm24263-201ENSMUST00000104059 107 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Snord19-201ENSMUST00000104609 76 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm14880-201ENSMUST00000117581 292 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm24392-201ENSMUST00000158136 103 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm24667-201ENSMUST00000158938 103 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm23355-201ENSMUST00000177614 107 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm24304-201ENSMUST00000177635 107 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm23002-201ENSMUST00000179221 107 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm23571-201ENSMUST00000180073 127 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm23148-201ENSMUST00000180367 107 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm6802-202ENSMUST00000186566 126 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm42830-201ENSMUST00000196642 313 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm9379-201ENSMUST00000196790 646 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm6615-201ENSMUST00000199426 631 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm45273-201ENSMUST00000211559 281 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 CT025689.3-201ENSMUST00000223817 301 ntBASIC4.72□□□□□ -1.65
Trim11Q99PQ2 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim11Q99PQ2 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.71□□□□□ -1.65
Trim11Q99PQ2 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Trim11Q99PQ2 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Trim11Q99PQ2 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm650-201ENSMUST00000144428 1551 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm13457-201ENSMUST00000117885 267 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm14037-201ENSMUST00000120576 313 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm22453-201ENSMUST00000122801 318 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm4916-201ENSMUST00000126139 642 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm25392-201ENSMUST00000157335 297 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm20542-201ENSMUST00000174582 372 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Mir669k-201ENSMUST00000177742 127 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm23215-201ENSMUST00000178153 121 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm25673-201ENSMUST00000179957 127 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm37713-201ENSMUST00000191746 198 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm7182-201ENSMUST00000193351 732 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm25078-201ENSMUST00000082530 107 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm23239-201ENSMUST00000083006 181 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim11Q99PQ2 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trim11Q99PQ2 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trim11Q99PQ2 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim11Q99PQ2 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.7□□□□□ -1.66
Trim11Q99PQ2 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim11Q99PQ2 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Trim11Q99PQ2 Mir687-201ENSMUST00000102166 89 ntBASIC4.7□□□□□ -1.66
Trim11Q99PQ2 Gm24951-201ENSMUST00000102182 109 ntBASIC4.7□□□□□ -1.66
Trim11Q99PQ2 Gm22472-201ENSMUST00000104115 134 ntBASIC4.7□□□□□ -1.66
Trim11Q99PQ2 Gm13714-201ENSMUST00000117313 221 ntBASIC4.7□□□□□ -1.66
Trim11Q99PQ2 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms