Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm24739-201ENSMUST00000158855 292 ntBASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 Gm27535-201ENSMUST00000183814 157 ntBASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 Mir6335-201ENSMUST00000184081 98 ntBASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 Gm17966-201ENSMUST00000193453 594 ntBASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 Gm2189-201ENSMUST00000201419 429 ntBASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Pcdha9Q91Y11 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm22936-201ENSMUST00000103955 126 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm22195-201ENSMUST00000116861 108 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm12025-201ENSMUST00000117768 144 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm11577-201ENSMUST00000118030 737 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm22036-201ENSMUST00000157279 215 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Mir6338-201ENSMUST00000183389 109 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm43955-201ENSMUST00000204332 142 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm44989-201ENSMUST00000204749 217 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Gm44794-201ENSMUST00000206550 411 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.68□□□□□ -1.82
Pcdha9Q91Y11 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm15844-201ENSMUST00000118016 576 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm13167-201ENSMUST00000118554 578 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm12235-201ENSMUST00000118596 170 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm8121-201ENSMUST00000153583 499 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm27308-201ENSMUST00000184807 233 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm43115-201ENSMUST00000196244 160 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm44343-201ENSMUST00000196702 90 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm42621-201ENSMUST00000198114 275 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm44063-201ENSMUST00000203307 376 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm45119-201ENSMUST00000207612 199 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm45815-201ENSMUST00000220241 146 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm26164-201ENSMUST00000083793 104 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.67□□□□□ -1.82
Pcdha9Q91Y11 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Gm25727-201ENSMUST00000104522 131 ntBASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Gm13518-201ENSMUST00000120018 233 ntBASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Gm16354-201ENSMUST00000155376 150 ntBASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Gm26149-201ENSMUST00000157432 108 ntBASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Gm18384-201ENSMUST00000195974 808 ntBASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Gm45380-201ENSMUST00000210465 315 ntBASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Gm2710-201ENSMUST00000073196 603 ntBASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Mir101b-201ENSMUST00000083622 97 ntBASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdha9Q91Y11 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Pcdha9Q91Y11 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.65□□□□□ -1.82
Pcdha9Q91Y11 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Pcdha9Q91Y11 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Pcdha9Q91Y11 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.65□□□□□ -1.83
Pcdha9Q91Y11 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.65□□□□□ -1.83
Pcdha9Q91Y11 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.65□□□□□ -1.83
Pcdha9Q91Y11 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.65□□□□□ -1.83
Pcdha9Q91Y11 Gm25391-201ENSMUST00000157342 134 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms