Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm42672-201ENSMUST00000197821 352 ntBASIC1.44□□□□□ -2.18
Nup35Q8R4R6 Gm34701-202ENSMUST00000204685 360 ntBASIC1.44□□□□□ -2.18
Nup35Q8R4R6 Gm45386-201ENSMUST00000210194 218 ntBASIC1.44□□□□□ -2.18
Nup35Q8R4R6 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.44□□□□□ -2.18
Nup35Q8R4R6 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC1.44□□□□□ -2.18
Nup35Q8R4R6 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Nup35Q8R4R6 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.44□□□□□ -2.18
Nup35Q8R4R6 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Nup35Q8R4R6 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Nup35Q8R4R6 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm24716-201ENSMUST00000157524 104 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm22392-201ENSMUST00000177971 107 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm23860-201ENSMUST00000179446 132 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm37550-201ENSMUST00000193230 463 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm37993-201ENSMUST00000195301 988 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm43979-201ENSMUST00000203179 475 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm7039-201ENSMUST00000205138 346 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm44794-201ENSMUST00000206550 411 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.43□□□□□ -2.18
Nup35Q8R4R6 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Nup35Q8R4R6 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm13343-201ENSMUST00000116474 105 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm13555-201ENSMUST00000121668 319 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm22535-201ENSMUST00000158174 119 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm17119-201ENSMUST00000163943 280 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm26195-201ENSMUST00000175035 101 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm43171-201ENSMUST00000199882 291 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm44088-201ENSMUST00000204595 237 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 AC069561.3-201ENSMUST00000217321 114 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Nup35Q8R4R6 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm25130-201ENSMUST00000082650 156 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Gm22740-201ENSMUST00000083439 109 ntBASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Nup35Q8R4R6 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm15215-201ENSMUST00000117773 489 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm12941-201ENSMUST00000117934 220 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm14292-201ENSMUST00000118761 456 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm12793-201ENSMUST00000119268 292 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm11430-201ENSMUST00000121317 217 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm26256-201ENSMUST00000122499 186 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm22718-201ENSMUST00000122701 315 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Mir7667-201ENSMUST00000183866 63 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm27722-201ENSMUST00000183908 76 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm37989-201ENSMUST00000195202 803 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm8041-201ENSMUST00000199755 616 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm45530-201ENSMUST00000211658 225 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Gm7065-201ENSMUST00000222150 474 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Mir300-201ENSMUST00000083485 79 ntBASIC1.41□□□□□ -2.18
Nup35Q8R4R6 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Nup35Q8R4R6 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.4□□□□□ -2.18
Nup35Q8R4R6 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Nup35Q8R4R6 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Nup35Q8R4R6 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm15193-201ENSMUST00000120224 865 ntBASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm25624-201ENSMUST00000157222 275 ntBASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm24773-201ENSMUST00000158513 99 ntBASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm26214-201ENSMUST00000158581 107 ntBASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm21885-201ENSMUST00000178891 327 ntBASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm5900-201ENSMUST00000179862 375 ntBASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Mir8106-201ENSMUST00000184520 139 ntBASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Mir7678-201ENSMUST00000185076 71 ntBASIC1.4□□□□□ -2.19
Nup35Q8R4R6 Gm37533-201ENSMUST00000193848 545 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms