Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm3370-201ENSMUST00000171785 500 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm25999-201ENSMUST00000175398 133 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Mir6345-201ENSMUST00000184286 128 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm38060-201ENSMUST00000194822 464 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Clrn1Q8K445 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm46997-201ENSMUST00000222108 217 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm5265-201ENSMUST00000076828 342 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm25698-201ENSMUST00000082897 107 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm26273-201ENSMUST00000104180 131 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm13329-201ENSMUST00000117063 265 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm12982-201ENSMUST00000117408 190 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm15029-201ENSMUST00000119742 199 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm13967-201ENSMUST00000120404 380 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm11645-201ENSMUST00000121589 649 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm14810-201ENSMUST00000121628 486 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm5963-201ENSMUST00000143451 236 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm24481-201ENSMUST00000157210 102 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm25427-201ENSMUST00000157605 103 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm7449-201ENSMUST00000194393 663 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm42570-201ENSMUST00000195937 292 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.67□□□□□ -1.82
Clrn1Q8K445 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm10088-201ENSMUST00000074116 423 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm23518-201ENSMUST00000082835 153 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Clrn1Q8K445 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clrn1Q8K445 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Clrn1Q8K445 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.67□□□□□ -1.82
Clrn1Q8K445 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Clrn1Q8K445 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm15377-201ENSMUST00000119594 246 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm8840-201ENSMUST00000122454 386 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm25054-201ENSMUST00000157370 97 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm24720-201ENSMUST00000157518 166 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm24905-201ENSMUST00000158129 104 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm2862-201ENSMUST00000161524 328 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Mir1251-201ENSMUST00000175486 84 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm10067-201ENSMUST00000179462 348 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm27828-201ENSMUST00000184108 119 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Mir3620-201ENSMUST00000184710 61 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm4248-201ENSMUST00000196905 316 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.66□□□□□ -1.82
Clrn1Q8K445 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm23443-201ENSMUST00000082916 128 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm8074-201ENSMUST00000095071 252 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn1Q8K445 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.66□□□□□ -1.82
Clrn1Q8K445 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Clrn1Q8K445 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Clrn1Q8K445 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Clrn1Q8K445 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms