Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm26228-201ENSMUST00000082512 107 ntBASIC3.21□□□□□ -1.9
Atg4aQ8C9S8 Gm25080-201ENSMUST00000082526 107 ntBASIC3.21□□□□□ -1.9
Atg4aQ8C9S8 Gm22304-201ENSMUST00000082688 129 ntBASIC3.21□□□□□ -1.9
Atg4aQ8C9S8 Gm25518-201ENSMUST00000083864 107 ntBASIC3.21□□□□□ -1.9
Atg4aQ8C9S8 Gm5670-201ENSMUST00000093546 372 ntBASIC3.21□□□□□ -1.9
Atg4aQ8C9S8 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Atg4aQ8C9S8 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.21□□□□□ -1.9
Atg4aQ8C9S8 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Atg4aQ8C9S8 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm16428-201ENSMUST00000121193 723 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm8880-201ENSMUST00000121800 454 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm23887-201ENSMUST00000122683 172 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm26411-201ENSMUST00000157668 107 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm19932-201ENSMUST00000177033 313 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm27505-201ENSMUST00000185071 110 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm28594-201ENSMUST00000187022 661 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm18291-201ENSMUST00000190791 301 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm37807-201ENSMUST00000194310 190 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm37353-201ENSMUST00000194497 313 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm2436-201ENSMUST00000219562 774 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 AC158981.3-202ENSMUST00000228906 523 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm26055-201ENSMUST00000083038 107 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm23242-201ENSMUST00000083055 107 ntBASIC3.2□□□□□ -1.9
Atg4aQ8C9S8 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm23987-201ENSMUST00000117039 129 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm13046-201ENSMUST00000117391 501 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm14868-201ENSMUST00000117840 216 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm14694-201ENSMUST00000121856 282 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm22080-201ENSMUST00000157591 106 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm22849-201ENSMUST00000157713 307 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Mir6363-201ENSMUST00000184880 114 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm19193-201ENSMUST00000190263 590 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm44391-201ENSMUST00000198490 93 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 AC109212.1-201ENSMUST00000215561 427 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm22970-201ENSMUST00000083304 186 ntBASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Atg4aQ8C9S8 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm23175-201ENSMUST00000104371 132 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm12042-201ENSMUST00000120479 301 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm25807-201ENSMUST00000122783 305 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm26215-201ENSMUST00000158584 139 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm23268-201ENSMUST00000175494 78 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm23415-201ENSMUST00000175519 83 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm22633-201ENSMUST00000179834 107 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm5034-201ENSMUST00000199115 634 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm32222-201ENSMUST00000203296 298 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm44142-201ENSMUST00000203358 311 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm45879-201ENSMUST00000212521 392 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm46193-201ENSMUST00000219399 364 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 AC116465.1-201ENSMUST00000220324 235 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Gm6030-201ENSMUST00000078768 402 ntBASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Atg4aQ8C9S8 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm23747-201ENSMUST00000104228 131 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm11582-201ENSMUST00000121041 236 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm11456-201ENSMUST00000121070 256 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm15147-201ENSMUST00000122263 483 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm14364-201ENSMUST00000129209 267 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm24534-201ENSMUST00000157949 291 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm25066-201ENSMUST00000158145 123 ntBASIC3.17□□□□□ -1.9
Atg4aQ8C9S8 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms