Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm3851-201ENSMUST00000168653 318 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm28552-201ENSMUST00000190725 388 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm28314-201ENSMUST00000191276 345 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm29665-201ENSMUST00000191457 528 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm38080-201ENSMUST00000194035 268 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm42665-201ENSMUST00000202100 586 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm23721-201ENSMUST00000083005 107 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Snord15a-201ENSMUST00000083888 148 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm15098-201ENSMUST00000119036 1508 ntBASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Sh3rf3Q8C120 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm14687-201ENSMUST00000120206 363 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm14926-201ENSMUST00000120650 508 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm22034-201ENSMUST00000157283 134 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm22310-201ENSMUST00000157509 116 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Snord92-201ENSMUST00000175548 85 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm25817-201ENSMUST00000177758 121 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm24766-201ENSMUST00000179182 121 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Mir6355-201ENSMUST00000183687 106 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm29320-201ENSMUST00000185235 615 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm29179-202ENSMUST00000186138 615 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm29448-201ENSMUST00000186675 615 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm29314-201ENSMUST00000186800 615 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm28253-202ENSMUST00000187971 615 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm29169-201ENSMUST00000189835 615 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm37692-201ENSMUST00000192633 232 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm32175-201ENSMUST00000193641 346 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm37575-201ENSMUST00000195467 309 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Mir691-201ENSMUST00000199719 78 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm45678-201ENSMUST00000210509 295 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm5358-201ENSMUST00000212814 353 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm7540-201ENSMUST00000219764 926 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm18921-201ENSMUST00000221798 366 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm6462-201ENSMUST00000081488 304 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm25482-201ENSMUST00000083225 107 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm26329-201ENSMUST00000093723 110 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sh3rf3Q8C120 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm25376-201ENSMUST00000104340 133 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm25560-201ENSMUST00000104606 176 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm12782-201ENSMUST00000117519 727 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm14890-201ENSMUST00000117660 676 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm6565-201ENSMUST00000121217 438 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm14768-201ENSMUST00000122126 678 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm13725-201ENSMUST00000122139 207 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm26101-201ENSMUST00000157246 105 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm23901-201ENSMUST00000157570 107 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm24584-201ENSMUST00000157972 107 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm24314-201ENSMUST00000158274 123 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm22769-201ENSMUST00000158367 98 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm22286-201ENSMUST00000179708 107 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm28339-201ENSMUST00000185845 696 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm29062-201ENSMUST00000186032 694 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm29574-201ENSMUST00000186226 696 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm28828-201ENSMUST00000186601 696 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm28057-201ENSMUST00000186603 615 ntBASIC3.68□□□□□ -1.82
Sh3rf3Q8C120 Gm28896-201ENSMUST00000188609 696 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms