Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm24960-201ENSMUST00000157923 90 ntBASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Gm29641-201ENSMUST00000188955 259 ntBASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Gm29184-201ENSMUST00000190038 334 ntBASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Gm37778-201ENSMUST00000191732 190 ntBASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Gm37989-201ENSMUST00000195202 803 ntBASIC1.83□□□□□ -2.12
Trub1Q8C0D0 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Gm44585-201ENSMUST00000207150 607 ntBASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Gm18729-201ENSMUST00000217230 621 ntBASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Gm46193-201ENSMUST00000219399 364 ntBASIC1.83□□□□□ -2.12
Trub1Q8C0D0 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trub1Q8C0D0 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm6444-201ENSMUST00000119611 458 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm15274-201ENSMUST00000131442 291 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm21979-201ENSMUST00000139887 291 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm15259-201ENSMUST00000151262 291 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm16354-201ENSMUST00000155376 150 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm25283-201ENSMUST00000157272 77 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm24783-201ENSMUST00000157639 100 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm18397-201ENSMUST00000176704 587 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Mir6338-201ENSMUST00000183389 109 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm27959-201ENSMUST00000185172 111 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm29460-201ENSMUST00000188607 714 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm43193-201ENSMUST00000197732 441 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm43284-201ENSMUST00000200103 253 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm29920-201ENSMUST00000206876 754 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm25403-201ENSMUST00000082971 143 ntBASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trub1Q8C0D0 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm22843-201ENSMUST00000157710 134 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm22339-201ENSMUST00000157718 62 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm17119-201ENSMUST00000163943 280 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm24086-201ENSMUST00000175171 98 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm24572-201ENSMUST00000175505 88 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm29263-201ENSMUST00000188718 463 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm28384-201ENSMUST00000189079 463 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm43431-201ENSMUST00000198577 340 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm43979-201ENSMUST00000203179 475 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm44754-201ENSMUST00000208155 400 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm44656-201ENSMUST00000208428 490 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Gm21089-201ENSMUST00000215843 325 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trub1Q8C0D0 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trub1Q8C0D0 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm22936-201ENSMUST00000103955 126 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm23109-201ENSMUST00000116867 126 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm22151-201ENSMUST00000116963 58 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm11268-201ENSMUST00000118347 267 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm14915-201ENSMUST00000120747 204 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm11430-201ENSMUST00000121317 217 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm14694-201ENSMUST00000121856 282 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm13406-201ENSMUST00000121991 256 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm22483-201ENSMUST00000157986 274 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm22131-201ENSMUST00000178415 94 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Mir8106-201ENSMUST00000184520 139 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Mir7226-201ENSMUST00000184953 60 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm18667-201ENSMUST00000186523 484 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm8041-201ENSMUST00000199755 616 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm23247-201ENSMUST00000083373 107 ntBASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Trub1Q8C0D0 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.79□□□□□ -2.12
Trub1Q8C0D0 Gm14554-201ENSMUST00000119548 661 ntBASIC1.79□□□□□ -2.12
Trub1Q8C0D0 Gm14867-201ENSMUST00000120156 866 ntBASIC1.79□□□□□ -2.12
Trub1Q8C0D0 Gm14238-201ENSMUST00000120227 323 ntBASIC1.79□□□□□ -2.12
Trub1Q8C0D0 Gm11384-201ENSMUST00000121376 303 ntBASIC1.79□□□□□ -2.12
Trub1Q8C0D0 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.79□□□□□ -2.12
Trub1Q8C0D0 Gm26105-201ENSMUST00000157253 190 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 162.7 ms