Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Usp40Q8BWR4 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 AC104897.1-201ENSMUST00000222638 3628 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 n-R5s31-201ENSMUST00000104162 110 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm14627-201ENSMUST00000118931 567 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm15213-201ENSMUST00000122098 216 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm25066-201ENSMUST00000158145 123 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm17020-201ENSMUST00000172274 274 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm28030-201ENSMUST00000184987 138 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm29227-201ENSMUST00000187139 315 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm29034-201ENSMUST00000188099 315 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm28872-201ENSMUST00000191518 158 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm37338-201ENSMUST00000191986 127 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm37129-201ENSMUST00000195791 315 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm43932-201ENSMUST00000204499 52 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm45252-201ENSMUST00000211579 397 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Usp40Q8BWR4 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Usp40Q8BWR4 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm14581-201ENSMUST00000121726 198 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm26100-201ENSMUST00000157245 127 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm23078-201ENSMUST00000157848 148 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm24409-201ENSMUST00000157881 152 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm3027-201ENSMUST00000167579 451 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm3104-201ENSMUST00000171004 473 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Snord92-201ENSMUST00000175548 85 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm27374-201ENSMUST00000183660 81 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm42623-201ENSMUST00000197225 379 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm43529-201ENSMUST00000199178 412 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm8940-201ENSMUST00000212585 219 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm22829-201ENSMUST00000083771 106 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm23848-201ENSMUST00000083826 106 ntBASIC4.74□□□□□ -1.65
Usp40Q8BWR4 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Mir743b-201ENSMUST00000104751 77 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Gm37128-201ENSMUST00000192599 232 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Gm45207-201ENSMUST00000207469 145 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Gm45119-201ENSMUST00000207612 199 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Gm22293-201ENSMUST00000083314 109 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Mir496a-201ENSMUST00000093627 79 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.73□□□□□ -1.65
Usp40Q8BWR4 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Mir881-201ENSMUST00000104844 78 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Gm14810-201ENSMUST00000121628 486 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Gm23167-201ENSMUST00000157155 103 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Gm24997-201ENSMUST00000157910 105 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Gm25438-201ENSMUST00000158281 110 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Gm5263-201ENSMUST00000163646 601 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Gm26622-201ENSMUST00000180520 298 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Gm45002-201ENSMUST00000208045 120 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Gm46993-201ENSMUST00000220708 259 ntBASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Usp40Q8BWR4 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Usp40Q8BWR4 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm16032-201ENSMUST00000118534 168 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm14915-201ENSMUST00000120747 204 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm6762-201ENSMUST00000121769 289 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm22988-201ENSMUST00000122759 144 ntBASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.71□□□□□ -1.66
Usp40Q8BWR4 Gm22337-201ENSMUST00000157721 132 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms