Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Snora70-201ENSMUST00000083047 137 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm22674-201ENSMUST00000104413 131 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm6568-201ENSMUST00000122274 697 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm24439-201ENSMUST00000157894 117 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm25163-201ENSMUST00000158905 104 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm20656-201ENSMUST00000176925 518 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm27582-201ENSMUST00000184084 126 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm27505-201ENSMUST00000185071 110 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm29602-201ENSMUST00000186887 442 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm28299-201ENSMUST00000189908 339 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm37869-201ENSMUST00000193385 595 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm44476-201ENSMUST00000196225 91 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm44256-201ENSMUST00000203304 335 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm46233-201ENSMUST00000217831 449 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm18921-201ENSMUST00000221798 366 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Gm25257-201ENSMUST00000083907 110 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Snrnp40Q6PE01 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.97
Snrnp40Q6PE01 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm22496-201ENSMUST00000104493 88 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Mir878-201ENSMUST00000104680 78 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm13806-201ENSMUST00000117822 325 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm25175-201ENSMUST00000178712 79 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm22851-201ENSMUST00000178741 94 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm25074-201ENSMUST00000178782 94 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm24464-201ENSMUST00000179697 107 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm28404-201ENSMUST00000190242 453 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm43402-201ENSMUST00000197159 159 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm43431-201ENSMUST00000198577 340 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm29848-201ENSMUST00000203107 295 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 AF357341-201ENSMUST00000083088 75 ntBASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Snrnp40Q6PE01 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Mir669o-201ENSMUST00000103898 96 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm11849-201ENSMUST00000121293 261 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm22199-201ENSMUST00000122660 126 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm26099-201ENSMUST00000157248 109 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm23124-201ENSMUST00000157650 107 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm22611-201ENSMUST00000158288 150 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm21673-201ENSMUST00000186640 436 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm21135-201ENSMUST00000189023 436 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm43901-201ENSMUST00000203247 453 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.76□□□□□ -1.97
Snrnp40Q6PE01 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms