Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rnu3a-202ENSMUST00000196710 213 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm44419-201ENSMUST00000203338 229 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm44881-201ENSMUST00000205425 367 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 AF357341-201ENSMUST00000083088 75 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Mir134-201ENSMUST00000083492 71 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Rnu3a-201ENSMUST00000083936 214 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm10212-201ENSMUST00000087884 324 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm6584-201ENSMUST00000119671 447 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm14883-201ENSMUST00000120179 157 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm12924-201ENSMUST00000121747 318 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm25054-201ENSMUST00000157370 97 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm23906-201ENSMUST00000157573 128 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm43855-201ENSMUST00000197462 507 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm34224-201ENSMUST00000204606 364 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm17829-201ENSMUST00000219782 344 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 AC117240.2-201ENSMUST00000220921 263 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Gm23406-201ENSMUST00000082537 122 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.64□□□□□ -1.83
Rnf220Q6PDX6 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm14688-201ENSMUST00000119169 303 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm14877-201ENSMUST00000119803 478 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm23886-201ENSMUST00000122684 313 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm22453-201ENSMUST00000122801 318 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm22501-201ENSMUST00000158981 127 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm24618-201ENSMUST00000177718 94 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm23215-201ENSMUST00000178153 121 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm23953-201ENSMUST00000178214 94 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm26332-201ENSMUST00000179813 94 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm22863-201ENSMUST00000180265 94 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm28155-201ENSMUST00000191066 151 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm37417-201ENSMUST00000195257 454 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm46998-201ENSMUST00000221444 330 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm19786-201ENSMUST00000222589 580 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm2710-201ENSMUST00000073196 603 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Gm23517-201ENSMUST00000082830 192 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Mir496a-201ENSMUST00000093627 79 ntBASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Rnf220Q6PDX6 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm25728-201ENSMUST00000104525 159 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm15151-201ENSMUST00000117106 177 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm11819-201ENSMUST00000122192 372 ntBASIC3.62□□□□□ -1.83
Rnf220Q6PDX6 Gm23214-201ENSMUST00000122716 157 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms