Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm24292-201ENSMUST00000082888 107 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm23097-201ENSMUST00000083448 105 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Ccdc36Q6PDM4 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Ccdc36Q6PDM4 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm26504-201ENSMUST00000102033 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm23987-201ENSMUST00000117039 129 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm13504-201ENSMUST00000117490 316 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm14897-201ENSMUST00000118213 207 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm12878-201ENSMUST00000118744 332 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm13356-201ENSMUST00000121678 335 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm3470-201ENSMUST00000160819 420 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm17119-201ENSMUST00000163943 280 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm17065-201ENSMUST00000165245 239 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm26502-201ENSMUST00000177732 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm25350-201ENSMUST00000177849 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm23446-201ENSMUST00000177977 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm26201-201ENSMUST00000178047 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm24711-201ENSMUST00000178062 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm24609-201ENSMUST00000178166 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm23265-201ENSMUST00000178321 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm22812-201ENSMUST00000178329 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm26246-201ENSMUST00000178388 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm25155-201ENSMUST00000178450 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm24760-201ENSMUST00000178530 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm22285-201ENSMUST00000178576 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm22417-201ENSMUST00000178656 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm26270-201ENSMUST00000178690 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm23313-201ENSMUST00000178931 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm23089-201ENSMUST00000178947 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm24153-201ENSMUST00000179280 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm25597-201ENSMUST00000179388 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm25816-201ENSMUST00000179764 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm26188-201ENSMUST00000179963 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm26433-201ENSMUST00000180227 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm22128-201ENSMUST00000180346 94 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Mir6353-201ENSMUST00000183596 113 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm28666-201ENSMUST00000186649 274 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm28802-201ENSMUST00000188624 944 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm28414-201ENSMUST00000190111 294 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm43652-201ENSMUST00000196219 675 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm44060-201ENSMUST00000204440 410 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm45366-201ENSMUST00000209828 384 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm46193-201ENSMUST00000219399 364 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm16261-201ENSMUST00000096813 205 ntBASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc36Q6PDM4 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm23175-201ENSMUST00000104371 132 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm25848-201ENSMUST00000116790 144 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm9043-201ENSMUST00000119677 314 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm12155-201ENSMUST00000121267 160 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm14101-201ENSMUST00000121502 473 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm9225-201ENSMUST00000121921 836 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm11229-201ENSMUST00000121993 437 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm14530-201ENSMUST00000122391 333 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm23325-201ENSMUST00000157422 129 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm26159-201ENSMUST00000158968 104 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Mir6341-201ENSMUST00000183490 121 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Mir6371-201ENSMUST00000184470 111 ntBASIC2.32□□□□□ -2.04
Ccdc36Q6PDM4 Gm28283-201ENSMUST00000185509 178 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms