Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm25801-201ENSMUST00000082638 106 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm23721-201ENSMUST00000083005 107 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm10242-201ENSMUST00000090064 330 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm12191-201ENSMUST00000118307 348 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm15026-201ENSMUST00000119219 458 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm9703-201ENSMUST00000119573 343 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm26276-201ENSMUST00000157099 109 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm20542-201ENSMUST00000174582 372 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm24618-201ENSMUST00000177718 94 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm23953-201ENSMUST00000178214 94 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm26332-201ENSMUST00000179813 94 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm22863-201ENSMUST00000180265 94 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm27392-201ENSMUST00000185041 101 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm7837-201ENSMUST00000190873 412 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm36891-201ENSMUST00000191995 655 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm37586-201ENSMUST00000193654 204 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm43704-201ENSMUST00000196164 496 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm43739-201ENSMUST00000198294 307 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm44419-201ENSMUST00000203338 229 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm45395-201ENSMUST00000209891 559 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm5175-202ENSMUST00000219699 529 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm2710-201ENSMUST00000073196 603 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm10343-201ENSMUST00000096279 348 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm42755-201ENSMUST00000198533 1493 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.6□□□□□ -1.83
Sp140Q6NSQ5 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm26145-201ENSMUST00000104476 127 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm24831-201ENSMUST00000116778 126 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm22107-201ENSMUST00000122548 100 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm23602-201ENSMUST00000157258 132 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm22034-201ENSMUST00000157283 134 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm25438-201ENSMUST00000158281 110 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Mir5127-201ENSMUST00000175295 71 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm19898-201ENSMUST00000177490 251 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm27624-201ENSMUST00000185047 177 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm30674-201ENSMUST00000214523 392 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm9318-201ENSMUST00000222444 438 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm4987-201ENSMUST00000078326 408 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm26447-201ENSMUST00000082448 129 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.59□□□□□ -1.83
Sp140Q6NSQ5 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Sp140Q6NSQ5 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.59□□□□□ -1.84
Sp140Q6NSQ5 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Mir466b-8-201ENSMUST00000103883 86 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm13046-201ENSMUST00000117391 501 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm14810-201ENSMUST00000121628 486 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm14768-201ENSMUST00000122126 678 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm5958-201ENSMUST00000147698 297 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm23000-201ENSMUST00000157083 139 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm24061-201ENSMUST00000157489 120 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm23581-201ENSMUST00000158531 63 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm8114-201ENSMUST00000172225 484 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm20534-201ENSMUST00000172957 172 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm23141-201ENSMUST00000178682 94 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm22448-201ENSMUST00000179254 107 ntBASIC3.58□□□□□ -1.84
Sp140Q6NSQ5 Gm29512-201ENSMUST00000185544 315 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms