Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm11456-201ENSMUST00000121070 256 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm16021-201ENSMUST00000121176 219 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm24627-201ENSMUST00000122764 138 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim27Q62158 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.24□□□□□ -1.89
Trim27Q62158 Gm25624-201ENSMUST00000157222 275 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm24439-201ENSMUST00000157894 117 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm11395-201ENSMUST00000181011 499 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Mir6402-201ENSMUST00000183406 80 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm21673-201ENSMUST00000186640 436 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm21135-201ENSMUST00000189023 436 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm37807-201ENSMUST00000194310 190 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm44476-201ENSMUST00000196225 91 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.24□□□□□ -1.89
Trim27Q62158 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim27Q62158 Gm45772-201ENSMUST00000212961 240 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 AC153957.1-201ENSMUST00000215235 229 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trim27Q62158 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trim27Q62158 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim27Q62158 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim27Q62158 Gm13806-201ENSMUST00000117822 325 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 Gm12042-201ENSMUST00000120479 301 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 Gm14362-201ENSMUST00000121679 273 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 Gm15254-201ENSMUST00000149567 273 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim27Q62158 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim27Q62158 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
Trim27Q62158 Gm11392-201ENSMUST00000181419 710 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 Gm18692-201ENSMUST00000193047 511 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 Gm7871-201ENSMUST00000195346 618 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 Gm43402-201ENSMUST00000197159 159 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.23□□□□□ -1.89
Trim27Q62158 Gm6030-201ENSMUST00000078768 402 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim27Q62158 Gm23847-201ENSMUST00000083829 110 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.23□□□□□ -1.89
Trim27Q62158 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim27Q62158 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim27Q62158 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm12191-201ENSMUST00000118307 348 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm9703-201ENSMUST00000119573 343 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm7327-201ENSMUST00000120925 652 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm11414-201ENSMUST00000121795 263 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm23212-201ENSMUST00000122718 60 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm26411-201ENSMUST00000157668 107 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm22538-201ENSMUST00000158169 299 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC3.22□□□□□ -1.89
Trim27Q62158 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim27Q62158 Gm17538-201ENSMUST00000168236 327 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trim27Q62158 Gm23402-201ENSMUST00000178130 107 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Mir7k-201ENSMUST00000184115 110 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm18964-201ENSMUST00000193013 563 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm42647-201ENSMUST00000195939 459 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm29848-201ENSMUST00000203107 295 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm44060-201ENSMUST00000204440 410 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm45105-201ENSMUST00000207824 397 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 AC116726.2-201ENSMUST00000217629 986 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Snord38a-201ENSMUST00000083746 71 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm25257-201ENSMUST00000083907 110 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Mir452-201ENSMUST00000093629 85 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Gm10343-201ENSMUST00000096279 348 ntBASIC3.22□□□□□ -1.89
Trim27Q62158 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim27Q62158 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim27Q62158 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim27Q62158 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Trim27Q62158 Gm23747-201ENSMUST00000104228 131 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Mir466k-201ENSMUST00000116774 122 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Gm13329-201ENSMUST00000117063 265 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim27Q62158 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim27Q62158 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim27Q62158 Gm23068-201ENSMUST00000158239 293 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Gm24757-201ENSMUST00000176987 371 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Gm27582-201ENSMUST00000184084 126 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Mir7j-201ENSMUST00000184427 122 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim27Q62158 Gm43582-201ENSMUST00000196149 343 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trim27Q62158 Gm44011-201ENSMUST00000203336 394 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Gm44903-201ENSMUST00000206840 130 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Gm45879-201ENSMUST00000212521 392 ntBASIC3.21□□□□□ -1.9
Trim27Q62158 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.21□□□□□ -1.9
Trim27Q62158 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms