Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ctr9Q62018 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ctr9Q62018 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ctr9Q62018 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm22782-201ENSMUST00000104082 132 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm14694-201ENSMUST00000121856 282 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm23033-201ENSMUST00000157996 134 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm24551-201ENSMUST00000158645 92 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Mir3964-201ENSMUST00000174898 74 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm24315-201ENSMUST00000177835 127 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm4076-201ENSMUST00000179230 965 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm24306-201ENSMUST00000180229 79 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Mir6541-201ENSMUST00000183649 110 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Mir496b-201ENSMUST00000184935 113 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm18185-201ENSMUST00000186725 667 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm28163-201ENSMUST00000187099 325 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm28597-201ENSMUST00000187664 666 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm6801-201ENSMUST00000190697 339 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.03□□□□□ -1.92
Ctr9Q62018 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.03□□□□□ -1.92
Ctr9Q62018 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm3442-201ENSMUST00000216808 710 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.03□□□□□ -1.92
Ctr9Q62018 Gm4017-201ENSMUST00000084813 338 ntBASIC3.03□□□□□ -1.92
Ctr9Q62018 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ctr9Q62018 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Ctr9Q62018 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm22771-201ENSMUST00000104449 91 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm14594-201ENSMUST00000118052 537 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm14590-201ENSMUST00000118934 537 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm14428-201ENSMUST00000120408 822 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm12770-201ENSMUST00000121734 462 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm13602-201ENSMUST00000122405 493 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm25706-201ENSMUST00000157828 247 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.02□□□□□ -1.93
Ctr9Q62018 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm14596-201ENSMUST00000180268 537 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm14595-201ENSMUST00000180335 537 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm37845-201ENSMUST00000194977 355 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm43355-201ENSMUST00000196541 346 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm45344-201ENSMUST00000211610 341 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm9174-201ENSMUST00000078149 255 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm22622-201ENSMUST00000082870 129 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Snord104-201ENSMUST00000083192 70 ntBASIC3.02□□□□□ -1.93
Ctr9Q62018 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ctr9Q62018 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
Ctr9Q62018 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Ctr9Q62018 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ctr9Q62018 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Ctr9Q62018 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm22658-201ENSMUST00000104196 155 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm11784-201ENSMUST00000118568 474 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm22793-201ENSMUST00000157227 330 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm20656-201ENSMUST00000176925 518 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm44609-201ENSMUST00000207157 460 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.01□□□□□ -1.93
Ctr9Q62018 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm25586-201ENSMUST00000082499 112 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm10343-201ENSMUST00000096279 348 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.01□□□□□ -1.93
Ctr9Q62018 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ctr9Q62018 Gm25526-201ENSMUST00000104332 132 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Gm11285-201ENSMUST00000118443 322 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Gm6574-201ENSMUST00000120037 362 ntBASIC3□□□□□ -1.93
Ctr9Q62018 n-R5s207-201ENSMUST00000122497 118 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Gm25784-201ENSMUST00000122524 81 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Gm22597-201ENSMUST00000157602 80 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Gm22500-201ENSMUST00000158982 99 ntBASIC3□□□□□ -1.93
Ctr9Q62018 AC154297.1-201ENSMUST00000171334 397 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ctr9Q62018 Gm45438-201ENSMUST00000210242 564 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Gm18346-201ENSMUST00000216782 325 ntBASIC3□□□□□ -1.93
Ctr9Q62018 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3□□□□□ -1.93
Ctr9Q62018 AC154603.1-201ENSMUST00000224355 313 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ctr9Q62018 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ctr9Q62018 Gm22508-201ENSMUST00000082772 110 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Gm26055-201ENSMUST00000083038 107 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Gm26494-201ENSMUST00000083154 143 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Gm24493-201ENSMUST00000083805 143 ntBASIC3□□□□□ -1.93
Ctr9Q62018 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Ctr9Q62018 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms