Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm9068-201ENSMUST00000217393 455 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Gm24460-201ENSMUST00000082731 106 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Gm23515-201ENSMUST00000082829 107 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Gm23136-201ENSMUST00000083425 99 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 AF357428-201ENSMUST00000083815 69 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CtcfQ61164 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CtcfQ61164 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CtcfQ61164 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CtcfQ61164 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CtcfQ61164 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CtcfQ61164 Gm26423-201ENSMUST00000104277 128 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm25111-201ENSMUST00000116686 147 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm12053-201ENSMUST00000119022 252 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm8217-201ENSMUST00000119136 465 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm14240-201ENSMUST00000120353 546 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm23886-201ENSMUST00000122684 313 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm24419-201ENSMUST00000157875 332 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm22136-201ENSMUST00000158751 268 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm24757-201ENSMUST00000176987 371 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CtcfQ61164 Gm26189-201ENSMUST00000179879 107 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm27028-201ENSMUST00000182303 399 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Mir6338-201ENSMUST00000183389 109 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm28069-201ENSMUST00000189926 214 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm18433-202ENSMUST00000195682 196 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm43624-201ENSMUST00000197368 180 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.47□□□□□ -1.85
CtcfQ61164 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm44142-201ENSMUST00000203358 311 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm18015-201ENSMUST00000214879 316 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.47□□□□□ -1.85
CtcfQ61164 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm23627-201ENSMUST00000082459 107 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm22502-201ENSMUST00000082488 107 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm24149-201ENSMUST00000082757 107 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Gm24533-201ENSMUST00000083138 196 ntBASIC3.47□□□□□ -1.85
CtcfQ61164 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CtcfQ61164 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CtcfQ61164 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CtcfQ61164 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CtcfQ61164 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CtcfQ61164 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CtcfQ61164 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm26504-201ENSMUST00000102033 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22115-201ENSMUST00000103976 133 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm23923-201ENSMUST00000104108 133 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm23744-201ENSMUST00000104231 149 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm14736-201ENSMUST00000121470 336 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm13409-201ENSMUST00000122072 546 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm25107-201ENSMUST00000122472 129 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm25781-201ENSMUST00000122527 84 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.46□□□□□ -1.86
CtcfQ61164 Gm24720-201ENSMUST00000157518 166 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm24192-201ENSMUST00000157978 145 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22258-201ENSMUST00000177645 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm26502-201ENSMUST00000177732 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm25350-201ENSMUST00000177849 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm23446-201ENSMUST00000177977 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm26201-201ENSMUST00000178047 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm24711-201ENSMUST00000178062 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm24609-201ENSMUST00000178166 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm23265-201ENSMUST00000178321 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22812-201ENSMUST00000178329 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm26246-201ENSMUST00000178388 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22131-201ENSMUST00000178415 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm25155-201ENSMUST00000178450 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm24760-201ENSMUST00000178530 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm26032-201ENSMUST00000178535 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22285-201ENSMUST00000178576 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22417-201ENSMUST00000178656 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm26270-201ENSMUST00000178690 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm25210-201ENSMUST00000178813 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm25157-201ENSMUST00000178914 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm23313-201ENSMUST00000178931 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm23089-201ENSMUST00000178947 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22046-201ENSMUST00000179027 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm24153-201ENSMUST00000179280 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm25597-201ENSMUST00000179388 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.46□□□□□ -1.86
CtcfQ61164 Gm22941-201ENSMUST00000179630 94 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms