Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm25451-201ENSMUST00000177832 121 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm28560-201ENSMUST00000186091 315 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm28334-201ENSMUST00000186653 315 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm28495-201ENSMUST00000188452 315 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm28232-201ENSMUST00000188683 315 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm28481-201ENSMUST00000189231 315 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm29059-201ENSMUST00000191534 315 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm37765-201ENSMUST00000192395 315 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm37237-201ENSMUST00000192893 315 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm36968-201ENSMUST00000193737 315 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm38290-201ENSMUST00000195238 315 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.34□□□□□ -2.03
Usf1Q61069 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.34□□□□□ -2.03
Usf1Q61069 Gm43114-201ENSMUST00000198298 343 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm42818-201ENSMUST00000198869 987 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm44477-201ENSMUST00000199661 110 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.34□□□□□ -2.03
Usf1Q61069 Gm44212-201ENSMUST00000205016 897 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Usf1Q61069 Gm17991-201ENSMUST00000208139 297 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Gm45387-201ENSMUST00000209792 632 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.34□□□□□ -2.03
Usf1Q61069 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Usf1Q61069 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
Usf1Q61069 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Usf1Q61069 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Usf1Q61069 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Usf1Q61069 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Usf1Q61069 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Usf1Q61069 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Usf1Q61069 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.34□□□□□ -2.04
Usf1Q61069 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Usf1Q61069 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Usf1Q61069 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Usf1Q61069 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm13806-201ENSMUST00000117822 325 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm13588-201ENSMUST00000120026 135 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm14736-201ENSMUST00000121470 336 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm22416-201ENSMUST00000158590 88 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm25119-201ENSMUST00000158815 88 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.33□□□□□ -2.04
Usf1Q61069 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm23568-201ENSMUST00000177960 92 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm4076-201ENSMUST00000179230 965 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm24829-201ENSMUST00000179245 92 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm28283-201ENSMUST00000185509 178 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm29013-201ENSMUST00000187431 237 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm29263-201ENSMUST00000188718 463 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm28384-201ENSMUST00000189079 463 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Mir6925-201ENSMUST00000197857 70 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm43393-201ENSMUST00000200147 194 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm45252-201ENSMUST00000211579 397 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm18000-201ENSMUST00000212153 800 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
Usf1Q61069 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Usf1Q61069 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Usf1Q61069 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Usf1Q61069 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.33□□□□□ -2.04
Usf1Q61069 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Usf1Q61069 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Usf1Q61069 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Usf1Q61069 Gm22752-201ENSMUST00000102083 109 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm26341-201ENSMUST00000104561 134 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm12386-201ENSMUST00000117380 688 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm12102-201ENSMUST00000118251 604 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm14841-201ENSMUST00000121067 758 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm7209-201ENSMUST00000122339 333 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.32□□□□□ -2.04
Usf1Q61069 Gm26173-201ENSMUST00000158416 136 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Usf1Q61069 Gm8338-201ENSMUST00000163928 363 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm17377-201ENSMUST00000165184 207 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm25156-201ENSMUST00000179809 79 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm24264-201ENSMUST00000179835 94 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm44324-201ENSMUST00000198517 135 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm44161-201ENSMUST00000203532 253 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm44961-201ENSMUST00000207450 196 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Gm18346-201ENSMUST00000216782 325 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Usf1Q61069 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Usf1Q61069 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usf1Q61069 Gm25130-201ENSMUST00000082650 156 ntBASIC2.32□□□□□ -2.04
Usf1Q61069 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Usf1Q61069 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Usf1Q61069 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usf1Q61069 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Usf1Q61069 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Usf1Q61069 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 123.2 ms