Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm10059-201ENSMUST00000131139 171 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm24636-201ENSMUST00000158673 288 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm20630-201ENSMUST00000177387 551 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm22367-201ENSMUST00000178930 132 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm27457-201ENSMUST00000184771 156 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm28650-201ENSMUST00000188413 411 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm28744-201ENSMUST00000189939 340 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm37361-201ENSMUST00000194345 132 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm32222-201ENSMUST00000203296 298 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm44032-201ENSMUST00000204841 166 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Gm37498-201ENSMUST00000193524 4002 ntBASIC5.76□□□□□ -1.49
Scaf1Q5U4C3 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Mir105-201ENSMUST00000104655 80 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Gm14593-201ENSMUST00000119948 294 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Gm13729-201ENSMUST00000120328 406 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 n-R5s45-201ENSMUST00000122592 110 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Gm22601-201ENSMUST00000157595 250 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Gm24961-201ENSMUST00000157918 184 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Gm24959-201ENSMUST00000157924 146 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Mir5710-201ENSMUST00000176884 69 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Gm8790-201ENSMUST00000194108 322 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Gm45879-201ENSMUST00000212521 392 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 AC160550.3-201ENSMUST00000226818 400 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Gm22806-201ENSMUST00000082738 136 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Gm25896-201ENSMUST00000083713 136 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 Gm22353-201ENSMUST00000083918 136 ntBASIC5.75□□□□□ -1.49
Scaf1Q5U4C3 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm25169-201ENSMUST00000104190 129 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm12760-201ENSMUST00000117861 482 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm13567-201ENSMUST00000118026 247 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm15896-201ENSMUST00000118045 440 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm24629-201ENSMUST00000122762 89 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm23474-201ENSMUST00000158884 75 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm23355-201ENSMUST00000177614 107 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm23215-201ENSMUST00000178153 121 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm23148-201ENSMUST00000180367 107 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm37300-201ENSMUST00000193327 280 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm7468-201ENSMUST00000203900 652 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm44475-201ENSMUST00000204041 424 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Gm25258-201ENSMUST00000083049 107 ntBASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scaf1Q5U4C3 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Mir551b-201ENSMUST00000102165 98 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm23746-201ENSMUST00000104229 125 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm23226-201ENSMUST00000116927 103 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm13737-201ENSMUST00000119793 232 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm14877-201ENSMUST00000119803 478 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm14516-201ENSMUST00000120012 252 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm14629-201ENSMUST00000122428 144 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm22816-201ENSMUST00000157450 117 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm24850-201ENSMUST00000158029 119 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm22156-201ENSMUST00000158409 141 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm20450-201ENSMUST00000173652 147 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm27580-201ENSMUST00000183666 149 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm1833-201ENSMUST00000191608 682 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm46138-201ENSMUST00000215294 426 ntBASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf1Q5U4C3 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Gm11448-201ENSMUST00000120427 450 ntBASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Gm14768-201ENSMUST00000122126 678 ntBASIC5.72□□□□□ -1.49
Scaf1Q5U4C3 Gm26171-201ENSMUST00000158422 131 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms