Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm45023-201ENSMUST00000207951 379 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm24624-201ENSMUST00000082617 164 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm13731-201ENSMUST00000117332 196 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm11367-201ENSMUST00000117802 120 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm11268-201ENSMUST00000118347 267 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm5646-201ENSMUST00000120568 714 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm25107-201ENSMUST00000122472 129 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm25666-201ENSMUST00000157702 107 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Mir5099-201ENSMUST00000175257 74 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Mir7059-201ENSMUST00000184825 59 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm37002-201ENSMUST00000194560 373 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm35570-201ENSMUST00000198730 681 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm44332-201ENSMUST00000203712 433 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm18598-201ENSMUST00000207724 597 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm6012-201ENSMUST00000210821 730 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm7751-201ENSMUST00000212868 709 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Mir448-201ENSMUST00000083516 112 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm23733-201ENSMUST00000083750 106 ntBASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col27a1Q5QNQ9 Gm24984-201ENSMUST00000104454 133 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm13046-201ENSMUST00000117391 501 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm11490-201ENSMUST00000118128 272 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm25321-201ENSMUST00000122558 102 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm22083-201ENSMUST00000157586 102 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm23033-201ENSMUST00000157996 134 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm25044-201ENSMUST00000158603 104 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm28169-201ENSMUST00000190342 345 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm43228-201ENSMUST00000200735 264 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm12432-201ENSMUST00000119540 186 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm12881-201ENSMUST00000121191 203 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm27715-201ENSMUST00000184714 260 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm27544-201ENSMUST00000185069 155 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm19641-201ENSMUST00000188432 417 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm35262-201ENSMUST00000215133 267 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm26055-201ENSMUST00000083038 107 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.73□□□□□ -2.13
Col27a1Q5QNQ9 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm23691-201ENSMUST00000101878 107 ntBASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm23336-201ENSMUST00000117023 123 ntBASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm14020-201ENSMUST00000118165 662 ntBASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm14913-201ENSMUST00000120011 1093 ntBASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm14989-201ENSMUST00000120497 207 ntBASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm29740-201ENSMUST00000193182 655 ntBASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 AC154552.5-201ENSMUST00000222352 207 ntBASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col27a1Q5QNQ9 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm12697-201ENSMUST00000118008 667 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm12934-201ENSMUST00000119221 343 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm14411-201ENSMUST00000121798 914 ntBASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.71□□□□□ -2.14
Col27a1Q5QNQ9 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms