Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Usp28Q5I043 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Usp28Q5I043 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Usp28Q5I043 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Usp28Q5I043 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm13581-201ENSMUST00000120675 278 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm22718-201ENSMUST00000122701 315 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm24552-201ENSMUST00000158646 103 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm4076-201ENSMUST00000179230 965 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm29263-201ENSMUST00000188718 463 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm29516-201ENSMUST00000190402 468 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm6801-201ENSMUST00000190697 339 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm9696-202ENSMUST00000191541 830 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm38044-201ENSMUST00000192964 487 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm45226-201ENSMUST00000206602 288 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.44□□□□□ -2.02
Usp28Q5I043 Gm22507-201ENSMUST00000082773 160 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Snord104-201ENSMUST00000083192 70 ntBASIC2.44□□□□□ -2.02
Usp28Q5I043 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Usp28Q5I043 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Usp28Q5I043 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm25526-201ENSMUST00000104332 132 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm12697-201ENSMUST00000118008 667 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm11813-201ENSMUST00000118586 291 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm14867-201ENSMUST00000120156 866 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm14428-201ENSMUST00000120408 822 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.43□□□□□ -2.02
Usp28Q5I043 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm25066-201ENSMUST00000158145 123 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm22517-201ENSMUST00000158265 136 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm23005-201ENSMUST00000158950 136 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm17119-201ENSMUST00000163943 280 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Mir3066-201ENSMUST00000175296 83 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm29641-201ENSMUST00000188955 259 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm42509-201ENSMUST00000197390 781 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm19147-201ENSMUST00000199622 652 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm34701-202ENSMUST00000204685 360 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm45438-201ENSMUST00000210242 564 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.43□□□□□ -2.02
Usp28Q5I043 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Usp28Q5I043 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Usp28Q5I043 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Usp28Q5I043 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm9174-201ENSMUST00000078149 255 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm26206-201ENSMUST00000082908 110 ntBASIC2.43□□□□□ -2.02
Usp28Q5I043 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Usp28Q5I043 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Usp28Q5I043 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm12393-201ENSMUST00000117084 848 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm11352-201ENSMUST00000119264 517 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm9043-201ENSMUST00000119677 314 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm13482-201ENSMUST00000119842 254 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm26101-201ENSMUST00000157246 105 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm22390-201ENSMUST00000157588 325 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm22733-201ENSMUST00000158094 91 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm9593-201ENSMUST00000166034 469 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm24816-201ENSMUST00000175311 151 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm21758-201ENSMUST00000179336 819 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
Usp28Q5I043 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Usp28Q5I043 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm29647-201ENSMUST00000188795 666 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm20832-201ENSMUST00000189076 665 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm28241-201ENSMUST00000190916 235 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm28504-201ENSMUST00000190977 666 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm37568-201ENSMUST00000191755 364 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm36984-201ENSMUST00000192770 235 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm31511-201ENSMUST00000193134 657 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm35843-201ENSMUST00000193716 666 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm30638-201ENSMUST00000195570 656 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm36728-201ENSMUST00000195782 665 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm7946-201ENSMUST00000203326 958 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm45232-201ENSMUST00000207811 162 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm45590-201ENSMUST00000209715 262 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm18160-201ENSMUST00000214279 827 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.42□□□□□ -2.02
Usp28Q5I043 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Usp28Q5I043 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Usp28Q5I043 Gm25755-201ENSMUST00000083396 107 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms