Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm17161-201ENSMUST00000169187 524 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm35570-201ENSMUST00000198730 681 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm43550-201ENSMUST00000200597 303 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm22293-201ENSMUST00000083314 109 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Mir320-201ENSMUST00000083594 82 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Snord71-201ENSMUST00000104361 85 ntBASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm11352-201ENSMUST00000119264 517 ntBASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm25557-201ENSMUST00000158084 315 ntBASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm5967-201ENSMUST00000172723 494 ntBASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm24656-201ENSMUST00000177548 132 ntBASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm27342-201ENSMUST00000183530 109 ntBASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm45445-201ENSMUST00000209586 232 ntBASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm18645-201ENSMUST00000209593 651 ntBASIC2.21□□□□□ -2.06
Shank3Q4ACU6 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.21□□□□□ -2.06
Shank3Q4ACU6 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Shank3Q4ACU6 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm12137-201ENSMUST00000119565 346 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm13273-201ENSMUST00000119737 159 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm12383-201ENSMUST00000120628 760 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Mir6411-201ENSMUST00000183556 108 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm29553-201ENSMUST00000189692 279 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm37817-201ENSMUST00000195276 434 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Mir6962-201ENSMUST00000199512 63 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm23733-201ENSMUST00000083750 106 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm22026-201ENSMUST00000122735 281 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm43541-201ENSMUST00000197208 581 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm18341-201ENSMUST00000197538 622 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm45316-201ENSMUST00000210128 162 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Gm45522-201ENSMUST00000210784 166 ntBASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.2□□□□□ -2.06
Shank3Q4ACU6 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Gm23760-201ENSMUST00000158350 116 ntBASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Gm25026-201ENSMUST00000175017 188 ntBASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Gm38213-201ENSMUST00000193203 173 ntBASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Gm43224-201ENSMUST00000201567 898 ntBASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Gm45063-201ENSMUST00000203726 472 ntBASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Shank3Q4ACU6 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm13731-201ENSMUST00000117332 196 ntBASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Nron-204ENSMUST00000158971 370 ntBASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm17065-201ENSMUST00000165245 239 ntBASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm17038-201ENSMUST00000166586 494 ntBASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Mir3112-201ENSMUST00000175431 82 ntBASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm29299-201ENSMUST00000185609 923 ntBASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Shank3Q4ACU6 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 228.7 ms