Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm15077-201ENSMUST00000122344 362 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm22199-201ENSMUST00000122660 126 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm25624-201ENSMUST00000157222 275 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm28591-201ENSMUST00000185259 183 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm28927-201ENSMUST00000191528 272 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm18964-201ENSMUST00000193013 563 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Trbv24-201ENSMUST00000194614 347 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm44041-201ENSMUST00000203678 396 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm19032-201ENSMUST00000208584 592 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm26228-201ENSMUST00000082512 107 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm25080-201ENSMUST00000082526 107 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm25518-201ENSMUST00000083864 107 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim40Q3UWA4 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm15936-201ENSMUST00000118706 460 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm12878-201ENSMUST00000118744 332 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm24211-201ENSMUST00000158264 107 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm24264-201ENSMUST00000179835 94 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm21729-201ENSMUST00000180058 664 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm21853-201ENSMUST00000180071 664 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Mir6402-201ENSMUST00000183406 80 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm27470-201ENSMUST00000184070 210 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm8151-201ENSMUST00000184817 871 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm27608-201ENSMUST00000184822 162 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Mir6363-201ENSMUST00000184880 114 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm27539-201ENSMUST00000184971 224 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm29495-201ENSMUST00000189319 664 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm29107-201ENSMUST00000190910 347 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm32381-201ENSMUST00000203192 476 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm44903-201ENSMUST00000206840 130 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.63□□□□□ -1.99
Trim40Q3UWA4 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm26504-201ENSMUST00000102033 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm26147-201ENSMUST00000104479 114 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm15443-201ENSMUST00000118947 820 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm6568-201ENSMUST00000122274 697 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm22187-201ENSMUST00000157819 129 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm22651-201ENSMUST00000157872 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord93-201ENSMUST00000175580 71 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm26502-201ENSMUST00000177732 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm25350-201ENSMUST00000177849 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm23446-201ENSMUST00000177977 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm26201-201ENSMUST00000178047 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm24711-201ENSMUST00000178062 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm24609-201ENSMUST00000178166 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm23265-201ENSMUST00000178321 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm22812-201ENSMUST00000178329 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm26246-201ENSMUST00000178388 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm25155-201ENSMUST00000178450 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm24760-201ENSMUST00000178530 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm22285-201ENSMUST00000178576 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm22417-201ENSMUST00000178656 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm26270-201ENSMUST00000178690 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm23313-201ENSMUST00000178931 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Gm23089-201ENSMUST00000178947 94 ntBASIC2.62□□□□□ -1.99
Trim40Q3UWA4 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms