Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Mir6997-201ENSMUST00000184313 71 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm28560-201ENSMUST00000186091 315 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm28334-201ENSMUST00000186653 315 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm28495-201ENSMUST00000188452 315 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm28232-201ENSMUST00000188683 315 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm28481-201ENSMUST00000189231 315 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm29059-201ENSMUST00000191534 315 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm37946-201ENSMUST00000192064 347 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm37765-201ENSMUST00000192395 315 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm37692-201ENSMUST00000192633 232 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm37237-201ENSMUST00000192893 315 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm36968-201ENSMUST00000193737 315 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm38290-201ENSMUST00000195238 315 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm43669-201ENSMUST00000198229 436 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm45288-201ENSMUST00000210236 151 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm46389-201ENSMUST00000223199 392 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Upf3aQ3ULJ3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm13728-201ENSMUST00000117471 400 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm15177-201ENSMUST00000120491 577 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm11430-201ENSMUST00000121317 217 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm22560-201ENSMUST00000157332 120 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm24962-201ENSMUST00000157917 109 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm29817-201ENSMUST00000210098 172 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm45438-201ENSMUST00000210242 564 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm24610-201ENSMUST00000083270 109 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm23096-201ENSMUST00000083447 107 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm25628-201ENSMUST00000084002 105 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Upf3aQ3ULJ3 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.4□□□□□ -2.02
Upf3aQ3ULJ3 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm23950-201ENSMUST00000104026 129 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm26077-201ENSMUST00000104064 123 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm6587-201ENSMUST00000120219 613 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm25102-201ENSMUST00000122479 112 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm24517-201ENSMUST00000122560 107 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm22803-201ENSMUST00000158049 283 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm22947-201ENSMUST00000158559 91 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm24086-201ENSMUST00000175171 98 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm25194-201ENSMUST00000177987 79 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm28745-201ENSMUST00000190069 305 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm37987-201ENSMUST00000194999 825 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm42805-201ENSMUST00000196158 276 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm43512-201ENSMUST00000198495 176 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm19147-201ENSMUST00000199622 652 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm43171-201ENSMUST00000199882 291 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm44041-201ENSMUST00000203678 396 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm18488-201ENSMUST00000215082 364 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm17890-201ENSMUST00000221419 757 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm23448-201ENSMUST00000083151 104 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm22740-201ENSMUST00000083439 109 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Upf3aQ3ULJ3 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Mir582-201ENSMUST00000103758 81 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 Gm22073-201ENSMUST00000122668 189 ntBASIC2.39□□□□□ -2.03
Upf3aQ3ULJ3 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms