Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.58□□□□□ -2
Trafd1Q3UDK1 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trafd1Q3UDK1 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm26247-201ENSMUST00000116702 91 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm25773-201ENSMUST00000116718 127 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trafd1Q3UDK1 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm23223-201ENSMUST00000158119 127 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm25902-201ENSMUST00000158493 318 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Trafd1Q3UDK1 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Mir3103-201ENSMUST00000175474 67 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm20656-201ENSMUST00000176925 518 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm22166-201ENSMUST00000178419 121 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm23288-201ENSMUST00000179213 121 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm24306-201ENSMUST00000180229 79 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Mir6541-201ENSMUST00000183649 110 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm5116-201ENSMUST00000187732 463 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm29627-201ENSMUST00000187984 463 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm38311-201ENSMUST00000192945 165 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm44910-201ENSMUST00000208451 396 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm45678-201ENSMUST00000210509 295 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Gm18113-201ENSMUST00000220630 303 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 CT010505.1-201ENSMUST00000227026 396 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trafd1Q3UDK1 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trafd1Q3UDK1 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trafd1Q3UDK1 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trafd1Q3UDK1 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.58□□□□□ -2
Trafd1Q3UDK1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trafd1Q3UDK1 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trafd1Q3UDK1 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trafd1Q3UDK1 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm25728-201ENSMUST00000104525 159 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Mir466f-3-201ENSMUST00000104788 94 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm13329-201ENSMUST00000117063 265 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm7327-201ENSMUST00000120925 652 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm14411-201ENSMUST00000121798 914 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm14765-201ENSMUST00000121954 326 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm11819-201ENSMUST00000122192 372 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm23886-201ENSMUST00000122684 313 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm24439-201ENSMUST00000157894 117 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm16232-201ENSMUST00000162856 167 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm17119-201ENSMUST00000163943 280 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm23268-201ENSMUST00000175494 78 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm23144-201ENSMUST00000180226 107 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm28343-201ENSMUST00000185386 112 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm19089-201ENSMUST00000197207 613 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm44256-201ENSMUST00000203304 335 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trafd1Q3UDK1 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trafd1Q3UDK1 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm25755-201ENSMUST00000083396 107 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm5670-201ENSMUST00000093546 372 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trafd1Q3UDK1 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trafd1Q3UDK1 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.57□□□□□ -2
Trafd1Q3UDK1 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm23128-201ENSMUST00000104257 132 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm14579-201ENSMUST00000117068 283 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm14293-201ENSMUST00000118528 577 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm14159-201ENSMUST00000119832 451 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Mir5129-201ENSMUST00000174938 78 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm21758-201ENSMUST00000179336 819 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm27028-201ENSMUST00000182303 399 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Mir7014-201ENSMUST00000183853 63 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm27957-201ENSMUST00000184054 127 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm29597-201ENSMUST00000188035 308 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm29647-201ENSMUST00000188795 666 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm20832-201ENSMUST00000189076 665 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm28241-201ENSMUST00000190916 235 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm28504-201ENSMUST00000190977 666 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm37281-201ENSMUST00000192412 439 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm38261-201ENSMUST00000192608 316 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm31511-201ENSMUST00000193134 657 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm37869-201ENSMUST00000193385 595 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm35843-201ENSMUST00000193716 666 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm30638-201ENSMUST00000195570 656 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm36728-201ENSMUST00000195782 665 ntBASIC2.56□□□□□ -2
Trafd1Q3UDK1 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms