Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm22561-201ENSMUST00000157331 84 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm17148-201ENSMUST00000164702 249 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21842-201ENSMUST00000177552 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21626-201ENSMUST00000177791 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21562-201ENSMUST00000177888 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21539-201ENSMUST00000177925 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm22108-201ENSMUST00000177961 106 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm26430-201ENSMUST00000178054 107 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm17522-201ENSMUST00000178144 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21599-201ENSMUST00000178249 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21914-201ENSMUST00000178452 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21723-201ENSMUST00000178692 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21916-201ENSMUST00000178771 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21801-201ENSMUST00000178865 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21633-201ENSMUST00000178941 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm23191-201ENSMUST00000179147 107 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm8532-201ENSMUST00000179174 461 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm24798-201ENSMUST00000179334 106 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21821-201ENSMUST00000179646 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21588-201ENSMUST00000180074 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21780-201ENSMUST00000180128 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21572-201ENSMUST00000180134 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm21529-201ENSMUST00000180175 498 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm10105-201ENSMUST00000184601 270 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm29370-202ENSMUST00000187476 499 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm29490-201ENSMUST00000190923 342 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm44041-201ENSMUST00000203678 396 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm45252-201ENSMUST00000211579 397 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 AC147240.1-201ENSMUST00000218767 431 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm24045-201ENSMUST00000083113 98 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm9119-201ENSMUST00000118866 495 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 AA413626-201ENSMUST00000121125 494 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm14810-201ENSMUST00000121628 486 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm24385-201ENSMUST00000122694 350 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm16327-201ENSMUST00000137146 228 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm24811-201ENSMUST00000175313 100 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm23415-201ENSMUST00000175519 83 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm42594-201ENSMUST00000199511 246 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm43406-201ENSMUST00000200356 334 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm44472-201ENSMUST00000204922 943 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm45101-201ENSMUST00000208327 232 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm23650-201ENSMUST00000083355 70 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.2□□□□□ -1.74
Ddb1Q3U1J4 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm23887-201ENSMUST00000122683 172 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm25637-201ENSMUST00000157529 107 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm23852-201ENSMUST00000158376 77 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm26195-201ENSMUST00000175035 101 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm29330-201ENSMUST00000190032 699 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm43355-201ENSMUST00000196541 346 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Gm22304-201ENSMUST00000082688 129 ntBASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ddb1Q3U1J4 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Ddb1Q3U1J4 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ddb1Q3U1J4 Snord116l9-201ENSMUST00000101891 94 ntBASIC4.18□□□□□ -1.74
Ddb1Q3U1J4 Gm26504-201ENSMUST00000102033 94 ntBASIC4.18□□□□□ -1.74
Ddb1Q3U1J4 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Ddb1Q3U1J4 Gm14518-201ENSMUST00000117351 542 ntBASIC4.18□□□□□ -1.74
Ddb1Q3U1J4 Gm14823-201ENSMUST00000117698 238 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms