Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Mir667-201ENSMUST00000102441 92 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm14868-201ENSMUST00000117840 216 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm11923-201ENSMUST00000118135 508 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm15313-201ENSMUST00000119179 282 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm15986-201ENSMUST00000122153 400 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm26476-201ENSMUST00000122618 313 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm22988-201ENSMUST00000122759 144 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm25624-201ENSMUST00000157222 275 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm22059-201ENSMUST00000157544 104 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm20698-201ENSMUST00000175657 233 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm24168-201ENSMUST00000178825 107 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm29408-201ENSMUST00000187536 216 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm37791-201ENSMUST00000195081 286 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm18384-201ENSMUST00000195974 808 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm43651-201ENSMUST00000199796 439 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Gm4036-201ENSMUST00000220842 626 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Usp39Q3TIX9 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Mir592-201ENSMUST00000102113 96 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm12568-201ENSMUST00000117362 624 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm12458-201ENSMUST00000119387 495 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm13396-201ENSMUST00000120617 271 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm25341-201ENSMUST00000157461 268 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm24537-201ENSMUST00000157950 102 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm6374-201ENSMUST00000159051 788 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm16232-201ENSMUST00000162856 167 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm16490-201ENSMUST00000165299 351 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm23365-201ENSMUST00000175019 125 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm25960-201ENSMUST00000175110 125 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm44453-201ENSMUST00000175161 126 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm20630-201ENSMUST00000177387 551 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm25195-201ENSMUST00000177656 126 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm22114-201ENSMUST00000177756 107 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm6625-201ENSMUST00000177870 272 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm27580-201ENSMUST00000183666 149 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm8242-202ENSMUST00000193056 475 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm37416-201ENSMUST00000193596 318 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Gm8940-201ENSMUST00000212585 219 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Usp39Q3TIX9 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm24581-201ENSMUST00000103962 133 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm26387-201ENSMUST00000104238 132 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm14825-201ENSMUST00000113538 701 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm14841-201ENSMUST00000121067 758 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm12956-201ENSMUST00000122184 414 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm23000-201ENSMUST00000157083 139 ntBASIC3.66□□□□□ -1.82
Usp39Q3TIX9 Gm24750-201ENSMUST00000157843 104 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms