Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.91□□□□□ -2.1
Cux1P53564 Gm5317-201ENSMUST00000204445 847 ntBASIC1.91□□□□□ -2.1
Cux1P53564 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cux1P53564 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Cux1P53564 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Cux1P53564 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Cux1P53564 Gm11556-201ENSMUST00000120751 288 ntBASIC1.9□□□□□ -2.11
Cux1P53564 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.9□□□□□ -2.11
Cux1P53564 Gm22603-201ENSMUST00000157603 96 ntBASIC1.9□□□□□ -2.11
Cux1P53564 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Cux1P53564 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.9□□□□□ -2.11
Cux1P53564 Gm22565-201ENSMUST00000175540 69 ntBASIC1.9□□□□□ -2.11
Cux1P53564 Npn2-202ENSMUST00000189275 235 ntBASIC1.9□□□□□ -2.11
Cux1P53564 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC1.9□□□□□ -2.11
Cux1P53564 Gm18188-201ENSMUST00000219386 478 ntBASIC1.9□□□□□ -2.11
Cux1P53564 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.9□□□□□ -2.11
Cux1P53564 Gm26493-201ENSMUST00000083155 136 ntBASIC1.9□□□□□ -2.11
Cux1P53564 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.9□□□□□ -2.11
Cux1P53564 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Gm13331-201ENSMUST00000117500 448 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Gm15382-201ENSMUST00000118011 537 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Gm14795-201ENSMUST00000118461 471 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Gm24632-201ENSMUST00000122770 323 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Gm24942-201ENSMUST00000158328 114 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Gm25715-201ENSMUST00000158627 125 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Gm17538-201ENSMUST00000168236 327 ntBASIC1.89□□□□□ -2.11
Cux1P53564 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Cux1P53564 Gm9632-201ENSMUST00000195934 643 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.89□□□□□ -2.11
Cux1P53564 Gm44818-201ENSMUST00000206608 358 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Gm9068-201ENSMUST00000217393 455 ntBASIC1.89□□□□□ -2.11
Cux1P53564 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.89□□□□□ -2.11
Cux1P53564 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Cux1P53564 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Cux1P53564 Gm26176-201ENSMUST00000083795 105 ntBASIC1.89□□□□□ -2.11
Cux1P53564 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cux1P53564 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Cux1P53564 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.88□□□□□ -2.11
Cux1P53564 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Cux1P53564 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Cux1P53564 Gm11367-201ENSMUST00000117802 120 ntBASIC1.88□□□□□ -2.11
Cux1P53564 Gm25768-201ENSMUST00000158570 98 ntBASIC1.88□□□□□ -2.11
Cux1P53564 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC1.88□□□□□ -2.11
Cux1P53564 Gm28169-201ENSMUST00000190342 345 ntBASIC1.88□□□□□ -2.11
Cux1P53564 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Cux1P53564 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Cux1P53564 Gm14442-201ENSMUST00000119690 1736 ntBASIC1.88□□□□□ -2.11
Cux1P53564 Gm15161-201ENSMUST00000117340 387 ntBASIC1.87□□□□□ -2.11
Cux1P53564 Gm14366-201ENSMUST00000121970 730 ntBASIC1.87□□□□□ -2.11
Cux1P53564 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.87□□□□□ -2.11
Cux1P53564 Gm2830-201ENSMUST00000140330 385 ntBASIC1.87□□□□□ -2.11
Cux1P53564 Gm22136-201ENSMUST00000158751 268 ntBASIC1.87□□□□□ -2.11
Cux1P53564 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.87□□□□□ -2.11
Cux1P53564 Mir6381-201ENSMUST00000183426 87 ntBASIC1.87□□□□□ -2.11
Cux1P53564 Gm21139-201ENSMUST00000186594 877 ntBASIC1.87□□□□□ -2.11
Cux1P53564 Gm28951-201ENSMUST00000190742 313 ntBASIC1.87□□□□□ -2.11
Cux1P53564 Gm32033-201ENSMUST00000193483 339 ntBASIC1.87□□□□□ -2.11
Cux1P53564 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC1.87□□□□□ -2.11
Cux1P53564 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Cux1P53564 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Cux1P53564 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.87□□□□□ -2.11
Cux1P53564 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Cux1P53564 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Cux1P53564 Gm14867-201ENSMUST00000120156 866 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm26371-201ENSMUST00000157829 104 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm25432-201ENSMUST00000158284 66 ntBASIC1.86□□□□□ -2.11
Cux1P53564 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.86□□□□□ -2.11
Cux1P53564 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Olfr1193-201ENSMUST00000081697 957 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm24144-201ENSMUST00000082632 111 ntBASIC1.86□□□□□ -2.11
Cux1P53564 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Cux1P53564 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC1.86□□□□□ -2.11
Cux1P53564 Mir3096-201ENSMUST00000116685 71 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm14751-201ENSMUST00000117693 222 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm13457-201ENSMUST00000117885 267 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm15037-201ENSMUST00000120358 259 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm14770-201ENSMUST00000122197 312 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm22957-201ENSMUST00000122511 123 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm12238-201ENSMUST00000127764 124 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm22390-201ENSMUST00000157588 325 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm16289-201ENSMUST00000162079 183 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Trbv12-3-201ENSMUST00000192675 372 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm44962-201ENSMUST00000206460 279 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Cux1P53564 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.86□□□□□ -2.11
Cux1P53564 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Cux1P53564 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.86□□□□□ -2.11
Cux1P53564 Gm25560-201ENSMUST00000104606 176 ntBASIC1.85□□□□□ -2.11
Cux1P53564 Gm11935-201ENSMUST00000118608 399 ntBASIC1.85□□□□□ -2.11
Cux1P53564 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.85□□□□□ -2.11
Cux1P53564 Gm37801-201ENSMUST00000194754 274 ntBASIC1.85□□□□□ -2.11
Cux1P53564 Gm43541-201ENSMUST00000197208 581 ntBASIC1.85□□□□□ -2.11
Cux1P53564 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.85□□□□□ -2.11
Cux1P53564 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Cux1P53564 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms