Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm6059-201ENSMUST00000196903 340 ntBASIC0.97□□□□□ -2.25
HttP42859 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC0.97□□□□□ -2.25
HttP42859 AC173345.3-201ENSMUST00000221245 1093 ntBASIC0.97□□□□□ -2.25
HttP42859 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
HttP42859 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.97□□□□□ -2.25
HttP42859 Gm15148-201ENSMUST00000117602 156 ntBASIC0.96□□□□□ -2.26
HttP42859 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HttP42859 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.96□□□□□ -2.26
HttP42859 Gm25697-201ENSMUST00000082902 98 ntBASIC0.96□□□□□ -2.26
HttP42859 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
HttP42859 Gm23605-201ENSMUST00000157255 127 ntBASIC0.96□□□□□ -2.26
HttP42859 Gm24262-201ENSMUST00000157431 144 ntBASIC0.96□□□□□ -2.26
HttP42859 Gm24465-201ENSMUST00000178398 107 ntBASIC0.96□□□□□ -2.26
HttP42859 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HttP42859 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC0.96□□□□□ -2.26
HttP42859 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
HttP42859 AC117226.1-201ENSMUST00000221635 3737 ntBASIC0.96□□□□□ -2.26
HttP42859 Gm24895-201ENSMUST00000122742 74 ntBASIC0.95□□□□□ -2.26
HttP42859 Gm29475-201ENSMUST00000190767 312 ntBASIC0.95□□□□□ -2.26
HttP42859 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC0.95□□□□□ -2.26
HttP42859 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC0.95□□□□□ -2.26
HttP42859 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC0.95□□□□□ -2.26
HttP42859 Gm19089-201ENSMUST00000197207 613 ntBASIC0.95□□□□□ -2.26
HttP42859 Gm44655-201ENSMUST00000207768 423 ntBASIC0.95□□□□□ -2.26
HttP42859 CT009713.4-201ENSMUST00000224246 272 ntBASIC0.95□□□□□ -2.26
HttP42859 AC123658.1-201ENSMUST00000228364 867 ntBASIC0.95□□□□□ -2.26
HttP42859 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HttP42859 Gm14591-201ENSMUST00000120407 518 ntBASIC0.95□□□□□ -2.26
HttP42859 Mir6380-201ENSMUST00000184334 81 ntBASIC0.95□□□□□ -2.26
HttP42859 CT033785.1-201ENSMUST00000224872 272 ntBASIC0.95□□□□□ -2.26
HttP42859 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HttP42859 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
HttP42859 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
HttP42859 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC0.95□□□□□ -2.26
HttP42859 Gm38060-201ENSMUST00000194822 464 ntBASIC0.95□□□□□ -2.26
HttP42859 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.95□□□□□ -2.26
HttP42859 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
HttP42859 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
HttP42859 Gm23749-201ENSMUST00000104223 131 ntBASIC0.94□□□□□ -2.26
HttP42859 Gm14876-201ENSMUST00000120795 327 ntBASIC0.94□□□□□ -2.26
HttP42859 Gm11389-201ENSMUST00000121407 430 ntBASIC0.94□□□□□ -2.26
HttP42859 Gm45907-201ENSMUST00000213023 193 ntBASIC0.94□□□□□ -2.26
HttP42859 Mir1192-201ENSMUST00000116976 121 ntBASIC0.94□□□□□ -2.26
HttP42859 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.94□□□□□ -2.26
HttP42859 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
HttP42859 Gm26473-201ENSMUST00000116763 127 ntBASIC0.93□□□□□ -2.26
HttP42859 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.93□□□□□ -2.26
HttP42859 Gm23234-201ENSMUST00000157304 134 ntBASIC0.93□□□□□ -2.26
HttP42859 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
HttP42859 Gm24165-201ENSMUST00000082718 128 ntBASIC0.93□□□□□ -2.26
HttP42859 Gm24208-201ENSMUST00000082783 135 ntBASIC0.93□□□□□ -2.26
HttP42859 Snord118-201ENSMUST00000082965 135 ntBASIC0.93□□□□□ -2.26
HttP42859 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
HttP42859 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC0.93□□□□□ -2.26
HttP42859 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC0.93□□□□□ -2.26
HttP42859 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.93□□□□□ -2.26
HttP42859 Gm37290-201ENSMUST00000195775 339 ntBASIC0.93□□□□□ -2.26
HttP42859 Gm26064-201ENSMUST00000083381 109 ntBASIC0.93□□□□□ -2.26
HttP42859 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.93□□□□□ -2.26
HttP42859 Gm26001-201ENSMUST00000157989 103 ntBASIC0.93□□□□□ -2.26
HttP42859 Mup-ps11-201ENSMUST00000178040 545 ntBASIC0.93□□□□□ -2.26
HttP42859 Mup-ps3-201ENSMUST00000178315 545 ntBASIC0.93□□□□□ -2.26
HttP42859 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
HttP42859 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
HttP42859 Gm11433-201ENSMUST00000118318 228 ntBASIC0.92□□□□□ -2.26
HttP42859 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.92□□□□□ -2.26
HttP42859 Gm15147-201ENSMUST00000122263 483 ntBASIC0.92□□□□□ -2.26
HttP42859 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC0.92□□□□□ -2.26
HttP42859 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
HttP42859 Gm14163-201ENSMUST00000117342 217 ntBASIC0.92□□□□□ -2.26
HttP42859 Gm22485-201ENSMUST00000157990 109 ntBASIC0.92□□□□□ -2.26
HttP42859 Gm23205-201ENSMUST00000158671 103 ntBASIC0.92□□□□□ -2.26
HttP42859 Gm17064-201ENSMUST00000167690 452 ntBASIC0.92□□□□□ -2.26
HttP42859 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
HttP42859 Gm33354-201ENSMUST00000195448 906 ntBASIC0.92□□□□□ -2.26
HttP42859 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.92□□□□□ -2.26
HttP42859 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
HttP42859 AC125488.1-201ENSMUST00000219586 212 ntBASIC0.91□□□□□ -2.26
HttP42859 Gm24258-201ENSMUST00000083739 133 ntBASIC0.91□□□□□ -2.26
HttP42859 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
HttP42859 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
HttP42859 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC0.91□□□□□ -2.26
HttP42859 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC0.91□□□□□ -2.26
HttP42859 AC165146.1-201ENSMUST00000223777 900 ntBASIC0.91□□□□□ -2.26
HttP42859 Gm23531-201ENSMUST00000104567 68 ntBASIC0.91□□□□□ -2.26
HttP42859 Gm23583-201ENSMUST00000158533 289 ntBASIC0.91□□□□□ -2.26
HttP42859 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
HttP42859 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.91□□□□□ -2.26
HttP42859 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
HttP42859 Gm6215-201ENSMUST00000119297 1386 ntBASIC0.9□□□□□ -2.26
HttP42859 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
HttP42859 Gm13903-201ENSMUST00000120945 193 ntBASIC0.9□□□□□ -2.27
HttP42859 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HttP42859 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HttP42859 Gm23144-201ENSMUST00000180226 107 ntBASIC0.9□□□□□ -2.27
HttP42859 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC0.9□□□□□ -2.27
HttP42859 AC126673.2-201ENSMUST00000221052 686 ntBASIC0.9□□□□□ -2.27
HttP42859 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.9□□□□□ -2.27
HttP42859 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.9□□□□□ -2.27
HttP42859 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms