Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
P20040 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
P20040 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.25□□□□□ -2.05
P20040 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.25□□□□□ -2.05
P20040 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.25□□□□□ -2.05
P20040 Gm22496-201ENSMUST00000104493 88 ntBASIC2.25□□□□□ -2.05
P20040 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
P20040 Gm11221-201ENSMUST00000117230 597 ntBASIC2.25□□□□□ -2.05
P20040 Gm14841-201ENSMUST00000121067 758 ntBASIC2.25□□□□□ -2.05
P20040 Gm25109-201ENSMUST00000122474 114 ntBASIC2.25□□□□□ -2.05
P20040 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
P20040 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.25□□□□□ -2.05
P20040 Gm26411-201ENSMUST00000157668 107 ntBASIC2.25□□□□□ -2.05
P20040 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.25□□□□□ -2.05
P20040 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
P20040 Gm9071-201ENSMUST00000165915 474 ntBASIC2.25□□□□□ -2.05
P20040 Gm22584-201ENSMUST00000177935 92 ntBASIC2.25□□□□□ -2.05
P20040 Gm25175-201ENSMUST00000178712 79 ntBASIC2.25□□□□□ -2.05
P20040 Gm24713-201ENSMUST00000178850 107 ntBASIC2.25□□□□□ -2.05
P20040 Gm23145-201ENSMUST00000178912 79 ntBASIC2.25□□□□□ -2.05
P20040 Gm25448-201ENSMUST00000180065 107 ntBASIC2.25□□□□□ -2.05
P20040 Gm37081-201ENSMUST00000192034 196 ntBASIC2.25□□□□□ -2.05
P20040 Gm38311-201ENSMUST00000192945 165 ntBASIC2.25□□□□□ -2.05
P20040 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.25□□□□□ -2.05
P20040 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.25□□□□□ -2.05
P20040 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.25□□□□□ -2.05
P20040 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
P20040 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.25□□□□□ -2.05
P20040 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.25□□□□□ -2.05
P20040 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.25□□□□□ -2.05
P20040 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.25□□□□□ -2.05
P20040 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
P20040 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
P20040 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
P20040 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
P20040 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
P20040 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.24□□□□□ -2.05
P20040 AA413626-201ENSMUST00000121125 494 ntBASIC2.24□□□□□ -2.05
P20040 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
P20040 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC2.24□□□□□ -2.05
P20040 Gm22563-201ENSMUST00000157333 269 ntBASIC2.24□□□□□ -2.05
P20040 Gm23078-201ENSMUST00000157848 148 ntBASIC2.24□□□□□ -2.05
P20040 Gm26173-201ENSMUST00000158416 136 ntBASIC2.24□□□□□ -2.05
P20040 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.24□□□□□ -2.05
P20040 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.24□□□□□ -2.05
P20040 Gm22716-201ENSMUST00000177596 107 ntBASIC2.24□□□□□ -2.05
P20040 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.24□□□□□ -2.05
P20040 Gm36984-201ENSMUST00000192770 235 ntBASIC2.24□□□□□ -2.05
P20040 Gm43402-201ENSMUST00000197159 159 ntBASIC2.24□□□□□ -2.05
P20040 Gm45590-201ENSMUST00000209715 262 ntBASIC2.24□□□□□ -2.05
P20040 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
P20040 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.24□□□□□ -2.05
P20040 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.24□□□□□ -2.05
P20040 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
P20040 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.24□□□□□ -2.05
P20040 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
P20040 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
P20040 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
P20040 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.23□□□□□ -2.05
P20040 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
P20040 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
P20040 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.23□□□□□ -2.05
P20040 Gm12102-201ENSMUST00000118251 604 ntBASIC2.23□□□□□ -2.05
P20040 Gm12513-201ENSMUST00000118617 352 ntBASIC2.23□□□□□ -2.05
P20040 Gm12793-201ENSMUST00000119268 292 ntBASIC2.23□□□□□ -2.05
P20040 Gm16428-201ENSMUST00000121193 723 ntBASIC2.23□□□□□ -2.05
P20040 Gm14629-201ENSMUST00000122428 144 ntBASIC2.23□□□□□ -2.05
P20040 Gm24517-201ENSMUST00000122560 107 ntBASIC2.23□□□□□ -2.05
P20040 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.23□□□□□ -2.05
P20040 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.23□□□□□ -2.05
P20040 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.23□□□□□ -2.05
P20040 Gm17946-201ENSMUST00000186856 538 ntBASIC2.23□□□□□ -2.05
P20040 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.23□□□□□ -2.05
P20040 Gm37029-201ENSMUST00000195773 239 ntBASIC2.23□□□□□ -2.05
P20040 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.23□□□□□ -2.05
P20040 Gm44212-201ENSMUST00000205016 897 ntBASIC2.23□□□□□ -2.05
P20040 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.23□□□□□ -2.05
P20040 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.23□□□□□ -2.05
P20040 Gm23247-201ENSMUST00000083373 107 ntBASIC2.23□□□□□ -2.05
P20040 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.23□□□□□ -2.05
P20040 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.23□□□□□ -2.05
P20040 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
P20040 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
P20040 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
P20040 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
P20040 Mir682-201ENSMUST00000102281 96 ntBASIC2.22□□□□□ -2.05
P20040 Gm26247-201ENSMUST00000116702 91 ntBASIC2.22□□□□□ -2.05
P20040 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.22□□□□□ -2.05
P20040 Gm12878-201ENSMUST00000118744 332 ntBASIC2.22□□□□□ -2.05
P20040 Gm14835-201ENSMUST00000119039 315 ntBASIC2.22□□□□□ -2.05
P20040 Gm13913-201ENSMUST00000121126 260 ntBASIC2.22□□□□□ -2.05
P20040 Gm13356-201ENSMUST00000121678 335 ntBASIC2.22□□□□□ -2.05
P20040 Gm14333-201ENSMUST00000130484 264 ntBASIC2.22□□□□□ -2.05
P20040 Gm22236-201ENSMUST00000157093 106 ntBASIC2.22□□□□□ -2.05
P20040 Gm23600-201ENSMUST00000157260 71 ntBASIC2.22□□□□□ -2.05
P20040 Gm24784-201ENSMUST00000157640 62 ntBASIC2.22□□□□□ -2.05
P20040 Gm25413-201ENSMUST00000158544 312 ntBASIC2.22□□□□□ -2.05
P20040 Mir5099-201ENSMUST00000175257 74 ntBASIC2.22□□□□□ -2.05
P20040 Gm27245-201ENSMUST00000184385 376 ntBASIC2.22□□□□□ -2.05
P20040 Gm5116-201ENSMUST00000187732 463 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms