Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm14649-201ENSMUST00000121814 324 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm14916-201ENSMUST00000121904 204 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm10444-201ENSMUST00000126708 148 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm23956-201ENSMUST00000157211 119 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm24392-201ENSMUST00000158136 103 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm25264-201ENSMUST00000158519 117 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm24667-201ENSMUST00000158938 103 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm16318-201ENSMUST00000162402 601 ntBASIC4.54□□□□□ -1.68
RaraP11416 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RaraP11416 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RaraP11416 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RaraP11416 Gm27568-201ENSMUST00000184220 99 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm37624-201ENSMUST00000193751 219 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm22062-201ENSMUST00000082563 107 ntBASIC4.54□□□□□ -1.68
RaraP11416 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.54□□□□□ -1.68
RaraP11416 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RaraP11416 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RaraP11416 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.54□□□□□ -1.68
RaraP11416 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
RaraP11416 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
RaraP11416 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.53□□□□□ -1.68
RaraP11416 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RaraP11416 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RaraP11416 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.53□□□□□ -1.68
RaraP11416 Gm22472-201ENSMUST00000104115 134 ntBASIC4.53□□□□□ -1.68
RaraP11416 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.53□□□□□ -1.68
RaraP11416 Gm16218-201ENSMUST00000155424 388 ntBASIC4.53□□□□□ -1.68
RaraP11416 Gm22447-201ENSMUST00000158155 92 ntBASIC4.53□□□□□ -1.68
RaraP11416 Gm25920-201ENSMUST00000158307 99 ntBASIC4.53□□□□□ -1.68
RaraP11416 Gm27387-201ENSMUST00000184583 116 ntBASIC4.53□□□□□ -1.68
RaraP11416 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RaraP11416 Gm34224-201ENSMUST00000204606 364 ntBASIC4.53□□□□□ -1.68
RaraP11416 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC4.53□□□□□ -1.68
RaraP11416 Gm45651-201ENSMUST00000210857 335 ntBASIC4.53□□□□□ -1.68
RaraP11416 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.53□□□□□ -1.68
RaraP11416 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.53□□□□□ -1.68
RaraP11416 Mir21a-201ENSMUST00000083521 92 ntBASIC4.53□□□□□ -1.68
RaraP11416 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RaraP11416 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.53□□□□□ -1.68
RaraP11416 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RaraP11416 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.53□□□□□ -1.69
RaraP11416 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RaraP11416 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RaraP11416 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RaraP11416 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RaraP11416 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RaraP11416 Gm15263-201ENSMUST00000121556 642 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm12238-201ENSMUST00000127764 124 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.52□□□□□ -1.69
RaraP11416 Gm22315-201ENSMUST00000158010 143 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm23219-201ENSMUST00000158123 87 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm24006-201ENSMUST00000158462 132 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm24552-201ENSMUST00000158646 103 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm23002-201ENSMUST00000179221 107 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm25024-201ENSMUST00000179667 104 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm37997-201ENSMUST00000193515 267 ntBASIC4.52□□□□□ -1.69
RaraP11416 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm6051-201ENSMUST00000201529 352 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.52□□□□□ -1.69
RaraP11416 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.52□□□□□ -1.69
RaraP11416 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.52□□□□□ -1.69
RaraP11416 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RaraP11416 Gm9818-201ENSMUST00000050900 255 ntBASIC4.52□□□□□ -1.69
RaraP11416 Mir99a-201ENSMUST00000083596 65 ntBASIC4.52□□□□□ -1.69
RaraP11416 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.52□□□□□ -1.69
RaraP11416 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RaraP11416 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RaraP11416 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RaraP11416 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RaraP11416 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.52□□□□□ -1.69
RaraP11416 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RaraP11416 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
RaraP11416 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RaraP11416 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RaraP11416 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RaraP11416 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RaraP11416 Gm22514-201ENSMUST00000122547 308 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm25967-201ENSMUST00000157168 147 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm22654-201ENSMUST00000157874 105 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm25223-201ENSMUST00000158200 110 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm25162-201ENSMUST00000158906 159 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm13249-201ENSMUST00000177803 345 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm13144-201ENSMUST00000179385 345 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm22450-201ENSMUST00000179641 107 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm25473-201ENSMUST00000180191 107 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm27851-201ENSMUST00000183529 63 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm27477-201ENSMUST00000184649 143 ntBASIC4.51□□□□□ -1.69
RaraP11416 Mir376a-201ENSMUST00000197584 68 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm35702-201ENSMUST00000198653 511 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm17887-201ENSMUST00000200194 547 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm7468-201ENSMUST00000203900 652 ntBASIC4.51□□□□□ -1.69
RaraP11416 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.51□□□□□ -1.69
RaraP11416 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm7117-201ENSMUST00000071515 387 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm23928-201ENSMUST00000082469 145 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm26071-201ENSMUST00000083261 107 ntBASIC4.51□□□□□ -1.69
RaraP11416 Gm24521-201ENSMUST00000083958 107 ntBASIC4.51□□□□□ -1.69
RaraP11416 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RaraP11416 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms