Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd3P09027 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd3P09027 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hoxd3P09027 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Hoxd3P09027 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Hoxd3P09027 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
Hoxd3P09027 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC3.85□□□□□ -1.79
Hoxd3P09027 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Hoxd3P09027 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Hoxd3P09027 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd3P09027 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC3.84□□□□□ -1.79
Hoxd3P09027 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd3P09027 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Hoxd3P09027 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd3P09027 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm24276-201ENSMUST00000102181 110 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm24117-201ENSMUST00000103973 133 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm25096-201ENSMUST00000104043 129 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Mir292-201ENSMUST00000104847 82 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm23492-201ENSMUST00000116837 115 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm16128-201ENSMUST00000117855 626 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm13172-201ENSMUST00000118685 256 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm25961-201ENSMUST00000157174 135 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm23713-201ENSMUST00000157353 70 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm22225-201ENSMUST00000157358 278 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm22967-201ENSMUST00000157956 239 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm25846-201ENSMUST00000158013 135 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm22615-201ENSMUST00000158102 70 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm27528-201ENSMUST00000183544 205 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.84□□□□□ -1.79
Hoxd3P09027 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm43925-201ENSMUST00000203498 206 ntBASIC3.84□□□□□ -1.79
Hoxd3P09027 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC3.84□□□□□ -1.79
Hoxd3P09027 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Hoxd3P09027 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Hoxd3P09027 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hoxd3P09027 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Hoxd3P09027 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm37205-201ENSMUST00000194820 2736 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hoxd3P09027 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Mir193b-201ENSMUST00000103784 79 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm11196-201ENSMUST00000119052 395 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm12071-201ENSMUST00000121968 469 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm8840-201ENSMUST00000122454 386 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm22557-201ENSMUST00000157804 102 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm22312-201ENSMUST00000158005 130 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm26482-201ENSMUST00000158015 62 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm25380-201ENSMUST00000175463 107 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm24641-201ENSMUST00000178055 107 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm25484-201ENSMUST00000178217 107 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm26138-201ENSMUST00000179236 107 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm22821-201ENSMUST00000179288 107 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm29668-201ENSMUST00000187802 315 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm38011-201ENSMUST00000193312 279 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm23140-201ENSMUST00000082487 107 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm23298-201ENSMUST00000083181 107 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm24614-201ENSMUST00000083269 107 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm22057-201ENSMUST00000083387 107 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm22576-201ENSMUST00000083733 104 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm25516-201ENSMUST00000083857 107 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.83□□□□□ -1.8
Hoxd3P09027 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hoxd3P09027 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Hoxd3P09027 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm37726-201ENSMUST00000193246 3886 ntBASIC3.83□□□□□ -1.8
Hoxd3P09027 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hoxd3P09027 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hoxd3P09027 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Hoxd3P09027 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hoxd3P09027 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Hoxd3P09027 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm22020-201ENSMUST00000104358 136 ntBASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm25391-201ENSMUST00000157342 134 ntBASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm27753-201ENSMUST00000184742 203 ntBASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm33866-201ENSMUST00000196911 289 ntBASIC3.82□□□□□ -1.8
Hoxd3P09027 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.82□□□□□ -1.8
Hoxd3P09027 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.82□□□□□ -1.8
Hoxd3P09027 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms