Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm14595-201ENSMUST00000180335 537 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm21088-201ENSMUST00000190875 316 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm43541-201ENSMUST00000197208 581 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm43264-201ENSMUST00000202284 325 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm19252-201ENSMUST00000204705 305 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm44634-201ENSMUST00000206119 152 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm5322-201ENSMUST00000206142 699 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
Col3a1P08121 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.29□□□□□ -1.88
Col3a1P08121 Gm35558-203ENSMUST00000222264 204 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col3a1P08121 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col3a1P08121 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col3a1P08121 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col3a1P08121 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Col3a1P08121 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Col3a1P08121 Gm24671-201ENSMUST00000104159 158 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm11862-201ENSMUST00000119678 659 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm22208-201ENSMUST00000122658 110 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm24192-201ENSMUST00000157978 145 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm23895-201ENSMUST00000158108 160 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm23473-201ENSMUST00000158883 116 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Mir6905-201ENSMUST00000184228 70 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm37658-201ENSMUST00000192672 315 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.28□□□□□ -1.88
Col3a1P08121 Gm2676-201ENSMUST00000207279 606 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm45232-201ENSMUST00000207811 162 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col3a1P08121 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col3a1P08121 Gm26494-201ENSMUST00000083154 143 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm24493-201ENSMUST00000083805 143 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm3867-201ENSMUST00000086108 279 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col3a1P08121 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col3a1P08121 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.28□□□□□ -1.88
Col3a1P08121 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Col3a1P08121 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
Col3a1P08121 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm11898-201ENSMUST00000117161 385 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm13439-201ENSMUST00000117541 409 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm12617-201ENSMUST00000121268 381 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.28□□□□□ -1.88
Col3a1P08121 Gm22842-201ENSMUST00000157709 118 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm24690-201ENSMUST00000157759 97 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm7582-201ENSMUST00000160831 603 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.28□□□□□ -1.88
Col3a1P08121 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.28□□□□□ -1.88
Col3a1P08121 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
Col3a1P08121 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col3a1P08121 Gm27660-201ENSMUST00000184028 208 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm27636-201ENSMUST00000184528 122 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.28□□□□□ -1.88
Col3a1P08121 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.28□□□□□ -1.88
Col3a1P08121 Gm44274-201ENSMUST00000203417 256 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm44041-201ENSMUST00000203678 396 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Gm45013-201ENSMUST00000206883 178 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.28□□□□□ -1.88
Col3a1P08121 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col3a1P08121 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Col3a1P08121 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
Col3a1P08121 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Mir682-201ENSMUST00000102281 96 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Gm24079-201ENSMUST00000104352 132 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Gm24890-201ENSMUST00000104389 102 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Gm12448-201ENSMUST00000118852 655 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.27□□□□□ -1.89
Col3a1P08121 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.27□□□□□ -1.89
Col3a1P08121 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Gm25243-201ENSMUST00000174912 207 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Gm25470-201ENSMUST00000175576 111 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col3a1P08121 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC3.27□□□□□ -1.89
Col3a1P08121 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC3.27□□□□□ -1.89
Col3a1P08121 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC3.27□□□□□ -1.89
Col3a1P08121 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC3.27□□□□□ -1.89
Col3a1P08121 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC3.27□□□□□ -1.89
Col3a1P08121 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC3.27□□□□□ -1.89
Col3a1P08121 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC3.27□□□□□ -1.89
Col3a1P08121 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC3.27□□□□□ -1.89
Col3a1P08121 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col3a1P08121 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Gm37616-201ENSMUST00000193974 322 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 Gm44208-201ENSMUST00000205199 421 ntBASIC3.27□□□□□ -1.89
Col3a1P08121 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms