Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Lmx1bO88609 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Lmx1bO88609 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm24982-201ENSMUST00000104456 132 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm13831-201ENSMUST00000118764 302 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm5958-201ENSMUST00000147698 297 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm22219-201ENSMUST00000157562 319 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm24858-201ENSMUST00000158058 323 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm17162-201ENSMUST00000168538 473 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm26501-201ENSMUST00000178307 107 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm24862-201ENSMUST00000179103 79 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm23310-201ENSMUST00000179105 79 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm25461-201ENSMUST00000179293 79 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm44343-201ENSMUST00000196702 90 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm44324-201ENSMUST00000198517 135 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm42526-201ENSMUST00000198956 393 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm45150-201ENSMUST00000206051 467 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Lmx1bO88609 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm23055-201ENSMUST00000082805 94 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm24611-201ENSMUST00000083272 107 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm23650-201ENSMUST00000083355 70 ntBASIC3.37□□□□□ -1.87
Lmx1bO88609 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Lmx1bO88609 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Lmx1bO88609 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.37□□□□□ -1.87
Lmx1bO88609 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Lmx1bO88609 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Lmx1bO88609 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Lmx1bO88609 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Lmx1bO88609 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.36□□□□□ -1.87
Lmx1bO88609 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm24338-201ENSMUST00000104205 127 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm15215-201ENSMUST00000117773 489 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm15037-201ENSMUST00000120358 259 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm14841-201ENSMUST00000121067 758 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm16327-201ENSMUST00000137146 228 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm25977-201ENSMUST00000158697 85 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm26005-201ENSMUST00000158802 134 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm20534-201ENSMUST00000172957 172 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Mir5129-201ENSMUST00000174938 78 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm28010-201ENSMUST00000179485 126 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm29320-201ENSMUST00000185235 615 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm29179-202ENSMUST00000186138 615 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm29448-201ENSMUST00000186675 615 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm29314-201ENSMUST00000186800 615 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm28253-202ENSMUST00000187971 615 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm29169-201ENSMUST00000189835 615 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm29704-201ENSMUST00000196011 253 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm44446-201ENSMUST00000204864 255 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm18453-201ENSMUST00000208000 626 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.36□□□□□ -1.87
Lmx1bO88609 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm8274-201ENSMUST00000219820 463 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.36□□□□□ -1.87
Lmx1bO88609 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm5265-201ENSMUST00000076828 342 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm23925-201ENSMUST00000082471 132 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm22061-201ENSMUST00000082557 107 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.36□□□□□ -1.87
Lmx1bO88609 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Lmx1bO88609 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Lmx1bO88609 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.35□□□□□ -1.87
Lmx1bO88609 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Lmx1bO88609 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Mir875-201ENSMUST00000104698 78 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Gm12191-201ENSMUST00000118307 348 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Gm15211-201ENSMUST00000118932 528 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Gm9703-201ENSMUST00000119573 343 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.35□□□□□ -1.87
Lmx1bO88609 Gm13396-201ENSMUST00000120617 271 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms