Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm44060-201ENSMUST00000204440 410 ntBASIC3.18□□□□□ -1.9
Cbx4O55187 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
Cbx4O55187 Gm45380-201ENSMUST00000210465 315 ntBASIC3.18□□□□□ -1.9
Cbx4O55187 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.18□□□□□ -1.9
Cbx4O55187 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.18□□□□□ -1.9
Cbx4O55187 AC132954.1-201ENSMUST00000221017 342 ntBASIC3.18□□□□□ -1.9
Cbx4O55187 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.18□□□□□ -1.9
Cbx4O55187 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cbx4O55187 Gm25512-201ENSMUST00000083863 107 ntBASIC3.18□□□□□ -1.9
Cbx4O55187 Gm10212-201ENSMUST00000087884 324 ntBASIC3.18□□□□□ -1.9
Cbx4O55187 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cbx4O55187 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cbx4O55187 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cbx4O55187 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cbx4O55187 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cbx4O55187 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cbx4O55187 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cbx4O55187 Gm24982-201ENSMUST00000104456 132 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cbx4O55187 Gm12765-201ENSMUST00000117273 615 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm12897-201ENSMUST00000120341 250 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
Cbx4O55187 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm26278-201ENSMUST00000157098 132 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm23169-201ENSMUST00000157157 112 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm24192-201ENSMUST00000157978 145 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm24857-201ENSMUST00000158061 310 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm22434-201ENSMUST00000158549 122 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm20542-201ENSMUST00000174582 372 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm25243-201ENSMUST00000174912 207 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm20656-201ENSMUST00000176925 518 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm24757-201ENSMUST00000176987 371 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Cbx4O55187 Gm24264-201ENSMUST00000179835 94 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm26180-201ENSMUST00000179942 107 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.17□□□□□ -1.9
Cbx4O55187 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC3.17□□□□□ -1.9
Cbx4O55187 Gm37104-201ENSMUST00000193278 196 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Cbx4O55187 Gm43704-201ENSMUST00000196164 496 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm43899-201ENSMUST00000203675 246 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.17□□□□□ -1.9
Cbx4O55187 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC3.17□□□□□ -1.9
Cbx4O55187 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 LOC667541-201ENSMUST00000223408 278 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm23345-201ENSMUST00000083817 150 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cbx4O55187 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cbx4O55187 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cbx4O55187 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.17□□□□□ -1.9
Cbx4O55187 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cbx4O55187 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Cbx4O55187 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Cbx4O55187 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Cbx4O55187 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Cbx4O55187 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm14852-201ENSMUST00000120065 647 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm25807-201ENSMUST00000122783 305 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm13901-201ENSMUST00000137252 468 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm22791-201ENSMUST00000157232 145 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm26100-201ENSMUST00000157245 127 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm22038-201ENSMUST00000157277 242 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm22722-201ENSMUST00000157467 132 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm22833-201ENSMUST00000158292 132 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Cbx4O55187 Gm20462-201ENSMUST00000172623 408 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm20534-201ENSMUST00000172957 172 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm21171-201ENSMUST00000180048 673 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm27905-201ENSMUST00000184005 207 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm28016-201ENSMUST00000184594 196 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm28002-201ENSMUST00000184832 100 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC3.16□□□□□ -1.9
Cbx4O55187 Gm28069-201ENSMUST00000189926 214 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm9696-202ENSMUST00000191541 830 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm37054-201ENSMUST00000193481 543 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.16□□□□□ -1.9
Cbx4O55187 Gm18433-202ENSMUST00000195682 196 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Cbx4O55187 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Cbx4O55187 Gm44030-201ENSMUST00000204865 432 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Gm36776-201ENSMUST00000207006 203 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.16□□□□□ -1.9
Cbx4O55187 AC147240.1-201ENSMUST00000218767 431 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 AC116460.1-201ENSMUST00000219040 313 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cbx4O55187 Gm24623-201ENSMUST00000082616 194 ntBASIC3.16□□□□□ -1.9
Cbx4O55187 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Cbx4O55187 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
Cbx4O55187 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Cbx4O55187 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Cbx4O55187 Gm15167-201ENSMUST00000121997 187 ntBASIC3.15□□□□□ -1.91
Cbx4O55187 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.15□□□□□ -1.91
Cbx4O55187 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.15□□□□□ -1.91
Cbx4O55187 Gm15733-201ENSMUST00000132957 242 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms