Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm24274-201ENSMUST00000116787 124 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm12191-201ENSMUST00000118307 348 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm12156-201ENSMUST00000119188 554 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm26349-201ENSMUST00000157530 130 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm22963-201ENSMUST00000157960 91 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm24878-201ENSMUST00000158782 104 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm17085-201ENSMUST00000165425 502 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm17162-201ENSMUST00000168538 473 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm24816-201ENSMUST00000175311 151 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm5900-201ENSMUST00000179862 375 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm27532-201ENSMUST00000183726 113 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm6445-201ENSMUST00000189515 1112 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm20776-201ENSMUST00000189940 700 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm43007-201ENSMUST00000197618 291 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm42672-201ENSMUST00000197821 352 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm43431-201ENSMUST00000198577 340 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm45530-201ENSMUST00000211658 225 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm18039-201ENSMUST00000217816 728 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Olfr197-201ENSMUST00000080031 926 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm24948-201ENSMUST00000082866 207 ntBASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm23747-201ENSMUST00000104228 131 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm14868-201ENSMUST00000117840 216 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm12878-201ENSMUST00000118744 332 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm14292-201ENSMUST00000118761 456 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm14593-201ENSMUST00000119948 294 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm14867-201ENSMUST00000120156 866 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm23885-201ENSMUST00000122682 294 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm16328-201ENSMUST00000126985 196 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm25624-201ENSMUST00000157222 275 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm24478-201ENSMUST00000157439 158 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm24905-201ENSMUST00000158129 104 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm22500-201ENSMUST00000158982 99 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm22392-201ENSMUST00000177971 107 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC1.45□□□□□ -2.18
Hmgb3O54879 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm27991-201ENSMUST00000184804 137 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Mir6376-201ENSMUST00000185149 131 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm7634-201ENSMUST00000185778 553 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm33866-201ENSMUST00000196911 289 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm44459-201ENSMUST00000203926 160 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm8940-201ENSMUST00000212585 219 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Hmgb3O54879 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm26128-201ENSMUST00000083170 110 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm24817-201ENSMUST00000093672 105 ntBASIC1.45□□□□□ -2.18
Hmgb3O54879 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm13343-201ENSMUST00000116474 105 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm12598-201ENSMUST00000117333 830 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm15312-201ENSMUST00000118827 271 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm14669-201ENSMUST00000118841 250 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm15193-201ENSMUST00000120224 865 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm13581-201ENSMUST00000120675 278 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm12926-201ENSMUST00000121158 409 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm11575-201ENSMUST00000122243 228 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm22535-201ENSMUST00000158174 119 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm24773-201ENSMUST00000158513 99 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
Hmgb3O54879 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Hmgb3O54879 Mir7241-201ENSMUST00000184532 64 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm27443-201ENSMUST00000184660 98 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm7299-201ENSMUST00000194441 581 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm37993-201ENSMUST00000195301 988 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm44477-201ENSMUST00000199661 110 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm44256-201ENSMUST00000203304 335 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm18991-201ENSMUST00000209225 746 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Hmgb3O54879 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm45965-201ENSMUST00000221192 1284 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Hmgb3O54879 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Hmgb3O54879 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Hmgb3O54879 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Hmgb3O54879 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm42801-201ENSMUST00000202562 2865 ntBASIC1.44□□□□□ -2.18
Hmgb3O54879 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.43□□□□□ -2.18
Hmgb3O54879 Gm15110-201ENSMUST00000117545 881 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms