| Cntnap3 | E9PY62 | Snord72-201 | ENSMUST00000104549 | 81 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm14296-202 | ENSMUST00000108931 | 750 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm13478-201 | ENSMUST00000118312 | 413 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm8217-201 | ENSMUST00000119136 | 465 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm13153-201 | ENSMUST00000120969 | 637 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm26020-201 | ENSMUST00000122729 | 183 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | n-R5s87-201 | ENSMUST00000122752 | 116 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm14041-201 | ENSMUST00000150181 | 276 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm25369-201 | ENSMUST00000158848 | 132 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm24664-201 | ENSMUST00000158939 | 100 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | 2210418O10Rik-204 | ENSMUST00000166464 | 750 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm29062-201 | ENSMUST00000186032 | 694 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | 1700067G17Rik-201 | ENSMUST00000186180 | 603 nt | TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm29665-201 | ENSMUST00000191457 | 528 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm42672-201 | ENSMUST00000197821 | 352 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Zfp813-ps-202 | ENSMUST00000204773 | 618 nt | TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm45207-201 | ENSMUST00000207469 | 145 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Olfr505-ps1-201 | ENSMUST00000207626 | 976 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm44925-201 | ENSMUST00000208879 | 2110 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm6303-201 | ENSMUST00000210123 | 471 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm45678-201 | ENSMUST00000210509 | 295 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Nat1-202 | ENSMUST00000212171 | 1208 nt | APPRIS ALT1 TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Scoc-204 | ENSMUST00000212449 | 280 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | AC121286.1-201 | ENSMUST00000218811 | 380 nt | TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm46997-201 | ENSMUST00000222108 | 217 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | AC124729.1-201 | ENSMUST00000225327 | 976 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | mt-Co3-201 | ENSMUST00000082409 | 784 nt | APPRIS P1 BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm25630-201 | ENSMUST00000084000 | 162 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Casp12-201 | ENSMUST00000027009 | 2649 nt | APPRIS P1 TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Olfr1226-206 | ENSMUST00000217601 | 2670 nt | APPRIS P1 TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | A630081D01Rik-201 | ENSMUST00000195842 | 1833 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Postn-203 | ENSMUST00000107985 | 3205 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | 9430025C20Rik-201 | ENSMUST00000068663 | 2115 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Mef2c-201 | ENSMUST00000005722 | 6217 nt | TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Svet1-201 | ENSMUST00000209370 | 3940 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm15902-202 | ENSMUST00000219623 | 3477 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Olfr789-201 | ENSMUST00000213236 | 4235 nt | APPRIS P1 TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Olfr875-202 | ENSMUST00000215128 | 2039 nt | APPRIS P1 TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm14008-201 | ENSMUST00000120483 | 274 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm14559-201 | ENSMUST00000121745 | 496 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm4916-201 | ENSMUST00000126139 | 642 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm24898-201 | ENSMUST00000158133 | 106 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm24681-201 | ENSMUST00000158760 | 107 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm17119-201 | ENSMUST00000163943 | 280 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm27903-201 | ENSMUST00000175482 | 126 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Rpl48-ps1-201 | ENSMUST00000177147 | 556 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm25360-201 | ENSMUST00000178786 | 191 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm24168-201 | ENSMUST00000178825 | 107 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm24863-201 | ENSMUST00000179499 | 107 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Mir6355-201 | ENSMUST00000183687 | 106 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | 1700015G11Rik-203 | ENSMUST00000185841 | 305 nt | APPRIS ALT2 TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm44649-201 | ENSMUST00000205608 | 364 nt | TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm44594-201 | ENSMUST00000208982 | 407 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | AC172751.1-201 | ENSMUST00000226887 | 440 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Olfr1317-201 | ENSMUST00000060098 | 951 nt | APPRIS P1 BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm23055-201 | ENSMUST00000082805 | 94 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm22169-201 | ENSMUST00000083229 | 107 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Mir452-201 | ENSMUST00000093629 | 85 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Olfr876-203 | ENSMUST00000215287 | 4474 nt | APPRIS P1 TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Vmn1r43-205 | ENSMUST00000228709 | 12646 nt | APPRIS P1 BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Olfr1356-202 | ENSMUST00000205100 | 3023 nt | APPRIS P1 TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Olfr787-202 | ENSMUST00000213329 | 4958 nt | APPRIS P1 TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm14421-201 | ENSMUST00000121755 | 1958 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm43834-201 | ENSMUST00000197097 | 4830 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | AC154386.1-201 | ENSMUST00000222753 | 2871 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm20619-201 | ENSMUST00000175814 | 2008 nt | TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Olfr1331-202 | ENSMUST00000106360 | 3230 nt | APPRIS P2 TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm5798-201 | ENSMUST00000164613 | 1751 nt | APPRIS P1 TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Nufip2-201 | ENSMUST00000100802 | 5158 nt | APPRIS P2 TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm43032-201 | ENSMUST00000197967 | 3123 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm24951-201 | ENSMUST00000102182 | 109 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Trav8d-2-201 | ENSMUST00000103605 | 334 nt | APPRIS ALT2 BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm15537-201 | ENSMUST00000126677 | 485 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm26320-201 | ENSMUST00000157742 | 306 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm22664-201 | ENSMUST00000158719 | 105 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm27521-201 | ENSMUST00000184022 | 64 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm29242-201 | ENSMUST00000186570 | 457 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm29352-201 | ENSMUST00000188054 | 544 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm45815-201 | ENSMUST00000220241 | 146 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | AC165164.2-201 | ENSMUST00000220313 | 392 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | n-R5s182-201 | ENSMUST00000083889 | 107 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm38073-201 | ENSMUST00000195141 | 3665 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | 3110080E11Rik-201 | ENSMUST00000210736 | 3477 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Vmn2r65-201 | ENSMUST00000044583 | 2538 nt | APPRIS P1 TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm42524-201 | ENSMUST00000202881 | 2214 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | AC133079.1-201 | ENSMUST00000220943 | 1881 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm17976-201 | ENSMUST00000184037 | 1909 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | D030040B21Rik-201 | ENSMUST00000181371 | 2788 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm22674-201 | ENSMUST00000104413 | 131 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm23322-201 | ENSMUST00000104464 | 167 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm23653-201 | ENSMUST00000116751 | 97 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm14586-201 | ENSMUST00000119571 | 408 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Junos-205 | ENSMUST00000130684 | 614 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm13901-201 | ENSMUST00000137252 | 468 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm12272-201 | ENSMUST00000138136 | 333 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm24858-201 | ENSMUST00000158058 | 323 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm23198-201 | ENSMUST00000158811 | 91 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm27828-201 | ENSMUST00000184108 | 119 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm29414-201 | ENSMUST00000185379 | 448 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| Cntnap3 | E9PY62 | Gm44391-201 | ENSMUST00000198490 | 93 nt | BASIC | 4.11 | □□□□□ -1.75 | | |