Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mir6371-201ENSMUST00000184470 111 ntBASIC1.17□□□□□ -2.22
Col6a4A2AX52 Gm28647-201ENSMUST00000188416 197 ntBASIC1.17□□□□□ -2.22
Col6a4A2AX52 Gm28779-201ENSMUST00000189678 323 ntBASIC1.17□□□□□ -2.22
Col6a4A2AX52 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC1.17□□□□□ -2.22
Col6a4A2AX52 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.17□□□□□ -2.22
Col6a4A2AX52 Gm44458-201ENSMUST00000196594 143 ntBASIC1.17□□□□□ -2.22
Col6a4A2AX52 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.17□□□□□ -2.22
Col6a4A2AX52 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.17□□□□□ -2.22
Col6a4A2AX52 Gm19563-201ENSMUST00000222031 270 ntBASIC1.17□□□□□ -2.22
Col6a4A2AX52 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Col6a4A2AX52 Mir10b-201ENSMUST00000083566 68 ntBASIC1.17□□□□□ -2.22
Col6a4A2AX52 Mir1192-201ENSMUST00000116976 121 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm15382-201ENSMUST00000118011 537 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm13082-201ENSMUST00000118877 561 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm23476-201ENSMUST00000158881 274 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm7346-201ENSMUST00000169661 476 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm28169-201ENSMUST00000190342 345 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm43345-201ENSMUST00000199484 269 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm42796-201ENSMUST00000199913 1087 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm44274-201ENSMUST00000203417 256 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm7648-201ENSMUST00000173036 1658 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm23015-201ENSMUST00000104145 128 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm25506-201ENSMUST00000104339 70 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm23886-201ENSMUST00000122684 313 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm23167-201ENSMUST00000157155 103 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm27698-201ENSMUST00000184060 249 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm37993-201ENSMUST00000195301 988 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Col6a4A2AX52 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm43407-201ENSMUST00000199816 317 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 CT009733.1-201ENSMUST00000225322 425 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 AC113031.2-201ENSMUST00000226132 579 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Col6a4A2AX52 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Col6a4A2AX52 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC1.16□□□□□ -2.22
Col6a4A2AX52 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.16□□□□□ -2.22
Col6a4A2AX52 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.22
Col6a4A2AX52 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm24126-201ENSMUST00000104111 106 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm26421-201ENSMUST00000104279 132 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm14841-201ENSMUST00000121067 758 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm26101-201ENSMUST00000157246 105 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm7858-201ENSMUST00000190177 622 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm7897-201ENSMUST00000193981 554 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm45023-201ENSMUST00000207951 379 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm11252-201ENSMUST00000120572 939 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm23053-201ENSMUST00000175136 96 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm43224-201ENSMUST00000201567 898 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 CT025525.3-201ENSMUST00000228858 366 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm25199-201ENSMUST00000083095 104 ntBASIC1.15□□□□□ -2.23
Col6a4A2AX52 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.15□□□□□ -2.23
Col6a4A2AX52 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm22843-201ENSMUST00000157710 134 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 Mir6379-201ENSMUST00000183392 115 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm27582-201ENSMUST00000184084 126 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm28951-201ENSMUST00000190742 313 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm32033-201ENSMUST00000193483 339 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm45049-201ENSMUST00000207586 591 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm20948-201ENSMUST00000211091 449 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 n-R5s50-201ENSMUST00000083168 111 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm44438-201ENSMUST00000204388 3236 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm6429-201ENSMUST00000117144 475 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm12392-201ENSMUST00000118014 938 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm17655-201ENSMUST00000167969 255 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm18964-201ENSMUST00000193013 563 ntBASIC1.14□□□□□ -2.23
Col6a4A2AX52 Gm42516-201ENSMUST00000198691 767 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms