Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trbv1A0A0B4J1G7 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.85□□□□□ -2.11
Trbv1A0A0B4J1G7 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trbv1A0A0B4J1G7 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm44680-201ENSMUST00000208414 2910 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm25088-201ENSMUST00000101803 79 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm24126-201ENSMUST00000104111 106 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm24691-201ENSMUST00000157762 140 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm25066-201ENSMUST00000158145 123 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm24137-201ENSMUST00000180055 79 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm22391-201ENSMUST00000180356 79 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm37946-201ENSMUST00000192064 347 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm19089-201ENSMUST00000197207 613 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm44324-201ENSMUST00000198517 135 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm43171-201ENSMUST00000199882 291 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm18691-201ENSMUST00000203593 872 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm44050-201ENSMUST00000204263 527 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm43955-201ENSMUST00000204332 142 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm32300-201ENSMUST00000221735 515 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 AC164597.2-201ENSMUST00000226738 603 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm24661-201ENSMUST00000083205 104 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm23645-201ENSMUST00000083228 108 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm23848-201ENSMUST00000083826 106 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm10343-201ENSMUST00000096279 348 ntBASIC1.84□□□□□ -2.11
Trbv1A0A0B4J1G7 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm37296-201ENSMUST00000192728 2922 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Mir344c-201ENSMUST00000103919 92 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm13510-201ENSMUST00000118659 429 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm14629-201ENSMUST00000122428 144 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm25270-201ENSMUST00000122606 138 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm16510-201ENSMUST00000153501 249 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm22817-201ENSMUST00000157448 356 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm24210-201ENSMUST00000158263 133 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm25365-201ENSMUST00000158852 121 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm16588-201ENSMUST00000162889 355 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm17377-201ENSMUST00000165184 207 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm2930-201ENSMUST00000170403 474 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm21894-201ENSMUST00000179631 546 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm3852-201ENSMUST00000182781 264 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Mir6993-201ENSMUST00000184912 65 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm28560-201ENSMUST00000186091 315 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm28334-201ENSMUST00000186653 315 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm17946-201ENSMUST00000186856 538 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm28495-201ENSMUST00000188452 315 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm28232-201ENSMUST00000188683 315 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm28481-201ENSMUST00000189231 315 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm29059-201ENSMUST00000191534 315 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm37765-201ENSMUST00000192395 315 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm37237-201ENSMUST00000192893 315 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm36968-201ENSMUST00000193737 315 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm38290-201ENSMUST00000195238 315 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm43901-201ENSMUST00000203247 453 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 AC126440.1-201ENSMUST00000227098 349 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm22974-201ENSMUST00000083301 103 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trbv1A0A0B4J1G7 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm22496-201ENSMUST00000104493 88 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm26247-201ENSMUST00000116702 91 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Mir466k-201ENSMUST00000116774 122 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm15094-201ENSMUST00000118394 1131 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm12721-201ENSMUST00000120621 268 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm11556-201ENSMUST00000120751 288 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm13862-201ENSMUST00000121220 197 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm22452-201ENSMUST00000122804 104 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm14333-201ENSMUST00000130484 264 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm2830-201ENSMUST00000140330 385 ntBASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trbv1A0A0B4J1G7 Gm22818-201ENSMUST00000157446 104 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms