Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm7039-201ENSMUST00000205138 346 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm45101-201ENSMUST00000208327 232 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm45438-201ENSMUST00000210242 564 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
H2afb1S4R1E0 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm9174-201ENSMUST00000078149 255 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm23614-201ENSMUST00000082598 107 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Snord38a-201ENSMUST00000083746 71 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
H2afb1S4R1E0 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm22831-201ENSMUST00000102473 109 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm14558-201ENSMUST00000117458 381 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm15799-201ENSMUST00000120899 289 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm11456-201ENSMUST00000121070 256 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm16428-201ENSMUST00000121193 723 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm15899-201ENSMUST00000128586 238 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm26101-201ENSMUST00000157246 105 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm25637-201ENSMUST00000157529 107 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm16111-201ENSMUST00000162128 285 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm20450-201ENSMUST00000173652 147 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm25470-201ENSMUST00000175576 111 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm26914-201ENSMUST00000182262 223 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm7654-201ENSMUST00000186738 683 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm28628-201ENSMUST00000187006 264 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm28629-201ENSMUST00000187309 263 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm19498-201ENSMUST00000191128 331 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm19147-201ENSMUST00000199622 652 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm7624-201ENSMUST00000209702 435 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm6012-201ENSMUST00000210821 730 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm9845-201ENSMUST00000056409 598 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm25853-201ENSMUST00000082793 132 ntBASIC2.7□□□□□ -1.98
H2afb1S4R1E0 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
H2afb1S4R1E0 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm22656-201ENSMUST00000104199 171 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm24889-201ENSMUST00000104388 132 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm11849-201ENSMUST00000121293 261 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm25624-201ENSMUST00000157222 275 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm20534-201ENSMUST00000172957 172 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm20672-201ENSMUST00000176605 261 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm26928-201ENSMUST00000182674 572 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm8747-201ENSMUST00000195392 751 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm43884-201ENSMUST00000204251 559 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm44472-201ENSMUST00000204922 943 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm44600-201ENSMUST00000208540 111 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm46193-201ENSMUST00000219399 364 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 AC102603.1-201ENSMUST00000227481 584 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.69□□□□□ -1.98
H2afb1S4R1E0 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm15190-201ENSMUST00000120855 276 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm23213-201ENSMUST00000122715 313 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm8338-201ENSMUST00000163928 363 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Mir5101-201ENSMUST00000175181 83 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm26297-201ENSMUST00000179464 132 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm37743-201ENSMUST00000194645 376 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm45387-201ENSMUST00000209792 632 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm45772-201ENSMUST00000212961 240 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm26228-201ENSMUST00000082512 107 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm25080-201ENSMUST00000082526 107 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Gm25518-201ENSMUST00000083864 107 ntBASIC2.68□□□□□ -1.98
H2afb1S4R1E0 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms